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scnpilot_expt_750_bf_scaffold_2876_6

Organism: SCNPILOT_EXPT_750_BF_Rhizobiales_63_5_fragment

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(3924..5030)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator with HTH domain and aminotransferase domain-containing protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DX05_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 355.0
  • Bit_score: 488
  • Evalue 4.30e-135
  • rbh
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAJ93821.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium g similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 355.0
  • Bit_score: 490
  • Evalue 2.70e-135
aminotransferase similarity KEGG
DB: KEGG
  • Identity: 67.9
  • Coverage: 355.0
  • Bit_score: 485
  • Evalue 1.40e-134

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1107
ATGCTGGTGCCGGGCGTGCCGGATGTCGAGGATTTTCCGCATGCCGCCTGGGCGCGTTGCCTGGCTGCCAGGGGACGGGCCTTGCGGGTGCACGATCTCGGTTACGACGACGTCTGCGGCCTGCCGATGCTGCGACAGGCGGTGCTCGATCATGTCGCCGTGACGCGCGGCGTGGTGGCGAAGGCCGGGCAGGTGCTGATCGTGCCCTCCACCCGCGCCGCCATCGATCTGCTCGGCCGTCTGCTCCTGCCGCCGCAAGGGGGCCGCGAGGCCGTCGCCTGGATCGAGGAGCCGGGATATTCCGCCGCGCAGGGGCTTTTGCGCCGGGCGGGCGCGCAGCTCGTGCCCGTCGCCTGCGACGAGGCCGGCATCCATCTCGCCAAGGCCGGCGGGCTGGCGCCGCGGCTGATCTACGTCACGCCGTCGCATCAATATCCGACGGGCGTGACCATGAGCCTGCAGCGGCGGCTGGCGCTGCTCGATTTCGCCCGGTCACAGGGCGCCCTGGTGCTGGAGGACGATTACGACAGCGAATTCCAGTACGGTTCCCGGCCGATCGCCGCCCTGCAGGGCATCGATCGTGGCGAGGTGGTAGCCTATCTCGGCACGTTTTCCAAGGTCCTGGCTCCGGGCCTGCGCGTCGCCTATCTCATCGTGCCGCCGCGGCTCTTGCCGCAGGTTGCCGTCGAACAGCGCCTGCGTGGCCTGGCGGTCCCGGTCCACATCCAGGCGGCATTGGCCGATTTCATGCGCGAGGGGCGGCTGCGGGCCTATCTGCGGCGGATGACGGTCCGTTATGCCGAGCGGATGGCGGCGACGGTCGCGGCGCTCGAACGCCATTGCGGCACCTGGCTGCAGATCGCTTCCGGCTCCGGCGGGCTGCAGCTGGCGGCCTGGTTCCGCGATCCCGGCATCGACGACCGGGCGGTGGCGCGGCTGCTCAATGCCGAGGGGTACGGCCTGAAGCCGATGTCGGACCTGTTTCTCGGGCCGCCGCGTCCGGGCCTGCTGTTCGGCATCGCCCGCGTGCGGCCGGATGAAATCGACAGGGTTGCCCGGCGGATCGGCAGCCTTTTCGACGACGCTTTCCACCGCCGCGCCGGTTAG
PROTEIN sequence
Length: 369
MLVPGVPDVEDFPHAAWARCLAARGRALRVHDLGYDDVCGLPMLRQAVLDHVAVTRGVVAKAGQVLIVPSTRAAIDLLGRLLLPPQGGREAVAWIEEPGYSAAQGLLRRAGAQLVPVACDEAGIHLAKAGGLAPRLIYVTPSHQYPTGVTMSLQRRLALLDFARSQGALVLEDDYDSEFQYGSRPIAALQGIDRGEVVAYLGTFSKVLAPGLRVAYLIVPPRLLPQVAVEQRLRGLAVPVHIQAALADFMREGRLRAYLRRMTVRYAERMAATVAALERHCGTWLQIASGSGGLQLAAWFRDPGIDDRAVARLLNAEGYGLKPMSDLFLGPPRPGLLFGIARVRPDEIDRVARRIGSLFDDAFHRRAG*