ggKbase home page

scnpilot_expt_750_bf_scaffold_6722_1

Organism: SCNPILOT_EXPT_750_BF_Rhodanobacter_69_7_fragment

partial RP 6 / 55 BSCG 8 / 51 MC: 2 ASCG 4 / 38
Location: comp(3..239)

Top 3 Functional Annotations

Value Algorithm Source
OmpA family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W215_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 73.0
  • Bit_score: 79
  • Evalue 1.30e-12
OmpA family protein {ECO:0000313|EMBL:EIL93506.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spath similarity UNIPROT
DB: UniProtKB
  • Identity: 53.4
  • Coverage: 73.0
  • Bit_score: 79
  • Evalue 1.80e-12
OmpA family protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 68.0
  • Bit_score: 70
  • Evalue 2.90e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 237
GTGCACGGCAAGACACGGATTTTTTCGCGCTTGTTTCTTGTGCTGATCGCATCGATCGGCAACGCAGCCATCGCTTCGGAATTTCCCTCGCACGACATGCGTGGAAGCCACGATCACCCGATCGTTTCGCGCTTCGCCGGATCGACGATCTTCGGCTACCAGCAGATCGACTATGGTTCGGCCACGCTGCCGATCGGCCCTTACGACGGCAACGCACAACACGGGTTCAAGCGCAGC
PROTEIN sequence
Length: 79
VHGKTRIFSRLFLVLIASIGNAAIASEFPSHDMRGSHDHPIVSRFAGSTIFGYQQIDYGSATLPIGPYDGNAQHGFKRS