ggKbase home page

scnpilot_p_inoc_scaffold_2701_6

Organism: SCNpilot_P_inoc_Chlorella_nuclear_28_4

partial RP 0 / 55 BSCG 4 / 51 ASCG 4 / 38
Location: comp(3772..5730)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: replication factor C subunit 4-like n=1 Tax=Cucumis sativus RepID=UPI0002B4C090 similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 277.0
  • Bit_score: 242
  • Evalue 9.60e-61
Uncharacterized protein {ECO:0000313|EMBL:KGN54543.1}; TaxID=3659 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 277.0
  • Bit_score: 242
  • Evalue 1.30e-60
rfcS; replication factor C small subunit similarity KEGG
DB: KEGG
  • Identity: 34.8
  • Coverage: 282.0
  • Bit_score: 171
  • Evalue 7.70e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Cucumis sativus → Cucumis → Cucurbitales → rosids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 1959
ATGAATATTGATAAAGTAAACAAGCAAAATAATATGCCATGGGTAGATAAATATAGACCCAAAAAATTAGATGATATTGTTCATCAGGAGGAAGTCATAAAAGTCTTAAAAACGACTTTAGAAACGGGACAATTACCGCATTTGCTATTGTACGGATCTAGTGGCACAGGAAAATGCTTGGGAATAAACACACCGGTTATTATGTATGATGGTTCCATTAAAATGGTACAAGATGTAAGACAAAATGATTTATTAATGGGTGATGACAATACTGCTCGAAAAGTATTAAGCTTAGCAAGAGGAAAAGATAAAATGTACAAAATAATGCAGGATAATGGAGATGATTATATTGTAAATTCGGAACATATTATTAGTTTGAAATTATCTGGTTCGTTCTTAGAAAAATGGGATGAAAAGAAACAAGAATATCGATTGGTTTGGTTTGAAAATCATGAAAAACAACAAAAGTCATTCACATTTAATCAAAAAAATTATTTAAAACAATTCAAACAGGATTTATTGACAAAACAATGTGTGAACAAAAAAGGAGATATATGCGATATATCAATAAAAGATTATTTAAAAAAGTCAAAAGAATGGAAAAGTTTATATAAGGGATTTAAATGTCAACAAATTAATTGTTGGAAAAAGAAAGAAACAAAATTTGATCCATATGGAATTGGTTACAGATTGGTTAATGAAGAAATAACAGACGAGCAATTTGATAATTATAAAATAAATGATATTGAAACTAGATTACAATTTTTGGCAGGATATTTGGATGCGAACGGACATATGGATAAAGAAAATAATTTTGAAATCAGTGTAAAATGTAAAAAAACATTTGATCACATAGTATTTATTGCCAGATCACTTGGATTAAAAGTCGAAAAATCAAATACACTTAGCAATATGGCTAAAATATATGGTAAAGTACCAACAAGAATAAAAAAACAAAAATTAGATGAGCATAATAATGAAAATTTATATGGAATAAAGATAAAAAAATTAAAATATGATAATTATTATGGATTTGAAATCGATGGCAACAAAAGATTTATATTAGGGGATTTCACTGTGACACATAATACATCAACAATATTGGCTGTGGCTTATCAATTGTTTGGACCAAAAATATTCAGGGAAAGAGTTATTGAATTGAATGCATCGGATGAAAGGGGAATAAATATTGTAAGATATAAAATAAATACTTTTGCTAGAACTGCAATTGGAAATGTAGATCCTAATTACCCTTGTCCACCATTTAAATTAGTAATTTTAGACGAAGCTGATGCAATGACAACAGAAGCTCAATCTGCTTTAAGAAAAGTTATGGAAGAGTTATCCAGTATCACAAGATTCTGTTTTATTTGTAATTACAAAAATCAAATAATAGATCCAATAGTATCCCGATGTATGAAGTTTAGATTCAAACCAATTAATAAAATTTCAATGTTCAATAAACTAAAGGATCTTTCTGAAAAAGAAAAGATGACTATAGATGATAACAGTCTGAAAGCAATTTCTCATATAGTTAAAGGTGACGTTCGAAAAGGAATTATGATATTGCAAAATCTAAGGTACATACAAAATTATAAATCAAAAATAACGGTAGATGATGTTTATAATATGACCGGATACACTTTTCCTGAATATATAAAACCAATATGGAATTTGTGTTTGAATAAAAAAACAAAGATAGAAACAATTGTGTCAAAACTTGATGTTATAAGACGTAATGCAACTCCAATAACTTCCATATTAGAAAATTTGCAACAAATTGTAGTTGACAGTAATCTTGACGATGATAAAAAGTCTAAAATTTGTTTGCATATAGCTTCAACAGAGAAATGTCTAACAGATGGTGCAGATGAATACATTCAACTGTTAAATATATTCAGTTATATTTATGGCCTCGTAAATGGACATATAACATATGTTCCTGATAATATATGTTAA
PROTEIN sequence
Length: 653
MNIDKVNKQNNMPWVDKYRPKKLDDIVHQEEVIKVLKTTLETGQLPHLLLYGSSGTGKCLGINTPVIMYDGSIKMVQDVRQNDLLMGDDNTARKVLSLARGKDKMYKIMQDNGDDYIVNSEHIISLKLSGSFLEKWDEKKQEYRLVWFENHEKQQKSFTFNQKNYLKQFKQDLLTKQCVNKKGDICDISIKDYLKKSKEWKSLYKGFKCQQINCWKKKETKFDPYGIGYRLVNEEITDEQFDNYKINDIETRLQFLAGYLDANGHMDKENNFEISVKCKKTFDHIVFIARSLGLKVEKSNTLSNMAKIYGKVPTRIKKQKLDEHNNENLYGIKIKKLKYDNYYGFEIDGNKRFILGDFTVTHNTSTILAVAYQLFGPKIFRERVIELNASDERGINIVRYKINTFARTAIGNVDPNYPCPPFKLVILDEADAMTTEAQSALRKVMEELSSITRFCFICNYKNQIIDPIVSRCMKFRFKPINKISMFNKLKDLSEKEKMTIDDNSLKAISHIVKGDVRKGIMILQNLRYIQNYKSKITVDDVYNMTGYTFPEYIKPIWNLCLNKKTKIETIVSKLDVIRRNATPITSILENLQQIVVDSNLDDDKKSKICLHIASTEKCLTDGADEYIQLLNIFSYIYGLVNGHITYVPDNIC*