ggKbase home page

SCNpilot_cont_300_bf_scaffold_1281_8

Organism: SCNpilot_cont_300_bf_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(4183..4962)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=3 Tax=Mycobacterium RepID=J9WM81_9MYCO similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 249.0
  • Bit_score: 169
  • Evalue 4.10e-39
Uncharacterized protein {ECO:0000313|EMBL:KDE98351.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19 similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 226.0
  • Bit_score: 201
  • Evalue 1.40e-48
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.7
  • Coverage: 247.0
  • Bit_score: 170
  • Evalue 6.80e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium aromaticivorans → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGAGCACGGGACAACGACCGATCGGGACCGGCAGCGGTCGCCGTCTCGCCGATCAGATGCAGATGCGGAAGATCAACATGCGCGACCTCGCCGCCCGGGCAGGATGCGACGAGCGGACGATACAGCGAGCCCTCAACGGCGAGACAACCCCGCAGTTGCGCGTCGCCGAAAGCATCGCCGCGGCGCTCGATTGCTCCGCTGAGGATCTCTGGCCTCGCGTCGGTCGGGGTGGCGCAGGAATCAGCGGCGCCGTCTGGGTGCGTATGTTCCCGTCACGCGCTGAAGTGCCGATCGAACTCTGGCGGGACGTGCTCTCGTCGGCTGCATCACGTATCGACATCTGCATGTACGGCGGCACGTTCCTTTTCGACAACGTGCACGGCTTCATTCGCATCATCCACGACGCCGCCGCGGAAGGAACACCGGTCCGGATCATGGTCGGCGACCCCGGGGCGTCAGCGATTCACCAGCGCGGTGTAGAAGAGGGCATCGGCGACGCGATCGCCGGACGCTGCAGGATGACGCTCTCGCATCTCGAGGCGCTCGACGGCGTGGACGGCGTCGAGTTACGCACCCACGCGACACCGCTCTATGTCACGATGTTCTTCATCGACGACACCCTGTACGCGAACCACCACATCCTTGGATCGCCCGCGGGCGATAACCCGGTCTACGAAGTCCCAGCCGACGCAAACCCGGAGCTCTGGCAGACGTACAACGCGTCGTTCGAGCGCATCTGGGACGGCGCCCGAGCGGTCACCTACCCCCTCGGTTACTGA
PROTEIN sequence
Length: 260
MSTGQRPIGTGSGRRLADQMQMRKINMRDLAARAGCDERTIQRALNGETTPQLRVAESIAAALDCSAEDLWPRVGRGGAGISGAVWVRMFPSRAEVPIELWRDVLSSAASRIDICMYGGTFLFDNVHGFIRIIHDAAAEGTPVRIMVGDPGASAIHQRGVEEGIGDAIAGRCRMTLSHLEALDGVDGVELRTHATPLYVTMFFIDDTLYANHHILGSPAGDNPVYEVPADANPELWQTYNASFERIWDGARAVTYPLGY*