ggKbase home page

SCNpilot_cont_300_bf_scaffold_3912_4

Organism: SCNpilot_cont_300_bf_UNK

megabin RP 54 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 25 / 38 MC: 19
Location: comp(3508..4392)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEY6_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 288.0
  • Bit_score: 322
  • Evalue 5.60e-85
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 288.0
  • Bit_score: 322
  • Evalue 1.60e-85
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB94177.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijer similarity UNIPROT
DB: UniProtKB
  • Identity: 58.7
  • Coverage: 288.0
  • Bit_score: 322
  • Evalue 7.90e-85

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Beijerinckia indica → Beijerinckia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGCGGCCGGTCAATCTCAACATGGACGTGCTGCGCACGCTGGCGAAGGCCGTCGAGCTCGGCGGCTTCGCACGCGCCGGAGAGGAACTCGGGCGCACGCAGTCTGCCGTGAGCCTGCAGATGAAGAAGCTCGAGGAGCAGGTCGGCCGACCGCTCTTCCGCAAGCAGGGCCGCAGCCTTCAGCTCACCGACGCCGGCGACGTTATCCTCGGCTATGCGCAGCGCATGCTGCAGCTGAACGACGAGGCGGTGGCGATGTCGCGCGCCGTCGGACTCGCCGGCACCGTCCGGCTCGGCGTGCCGCCGGACCTCGCCGAGAGCTGGCTCCCGGCCGCGCTGTCGCAATTCTCGCGGCTGCATCCCAACGTCCATATCGAGGCGCATGTCGACCGCAATGTCCGCCTCGTCGAACAGGCCGCGAAGGGCCAGCTCGATCTCGCACTCGCCTTCGGCGACGGGGAGGGGGCAGAAAGGCAGTTCGTCGCCGAGCTGCCGGTGCGCTGGATCGGGCGCCGCGGCGATCGGCTCGATCTCAGGCAGGGCGTCGCCCTGGTGCTTTTCGACCAGCCCTGCCTTTTCCGCGAGATCGGCATCGACGCGCTCGACCGCGCCGAGATCCGCTGGCGCCTCGCCTTCACCAGCCCAAGCCTCGCCGGCCTCTGGGCCGCCGCCGAAGCGGGGCTCGGCATCAGCGTCCGGACGCCGCTGGGTCTCCCCAAGGCGCTCTCGGTGATCGGCACCGAAGCGGGGCTTCCTCATCTCACGCAGACCGTTCGGCTGTCGCTCTATGCGGGCGTCGGACAGCCGACTCCAGCCGTCCTGCGGCTTCGCGCCATCATGCTCGAGACGCTGGCATCAGCGGTGCGCACAATTCGCGTCGGCTGA
PROTEIN sequence
Length: 295
MRPVNLNMDVLRTLAKAVELGGFARAGEELGRTQSAVSLQMKKLEEQVGRPLFRKQGRSLQLTDAGDVILGYAQRMLQLNDEAVAMSRAVGLAGTVRLGVPPDLAESWLPAALSQFSRLHPNVHIEAHVDRNVRLVEQAAKGQLDLALAFGDGEGAERQFVAELPVRWIGRRGDRLDLRQGVALVLFDQPCLFREIGIDALDRAEIRWRLAFTSPSLAGLWAAAEAGLGISVRTPLGLPKALSVIGTEAGLPHLTQTVRLSLYAGVGQPTPAVLRLRAIMLETLASAVRTIRVG*