ggKbase home page

SCNpilot_expt_300_bf_scaffold_8037_1

Organism: SCNpilot_expt_300_bf_UNK

megabin RP 54 / 55 MC: 51 BSCG 51 / 51 MC: 49 ASCG 23 / 38 MC: 16
Location: comp(2..214)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: huntingtin isoform X1 n=2 Tax=Aplysia californica RepID=UPI000359271D similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 65.0
  • Bit_score: 66
  • Evalue 1.30e-08
Uncharacterized protein {ECO:0000313|Ensembl:ENSXMAP00000005481}; TaxID=8083 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleo similarity UNIPROT
DB: UniProtKB
  • Identity: 46.3
  • Coverage: 67.0
  • Bit_score: 62
  • Evalue 2.10e-07
huntingtin-like similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 67.0
  • Bit_score: 61
  • Evalue 1.80e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Xiphophorus maculatus → Xiphophorus → Cyprinodontiformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 213
ATGAAATCGGGTTTTACTGGTTCACCATTTTTTATCTATCATGCAACCGAATTTCTCATGACACTTTCACTTGAAACATTCAGTTCGAAACAAGTCATTAAAATTCAAGATTTAATCAAACATTGCGATGCACTCAATGCCAGCGGACATGAACCTGAAACTCATGCACTATCAGCATTAGAACCTGTTGTCTATGATCTATTTCTTGTTCGT
PROTEIN sequence
Length: 71
MKSGFTGSPFFIYHATEFLMTLSLETFSSKQVIKIQDLIKHCDALNASGHEPETHALSALEPVVYDLFLVR