ggKbase home page

SCNpilot_expt_300_bf_scaffold_16379_1

Organism: SCNpilot_expt_300_bf_UNK

megabin RP 54 / 55 MC: 51 BSCG 51 / 51 MC: 49 ASCG 23 / 38 MC: 16
Location: 2..307

Top 3 Functional Annotations

Value Algorithm Source
Putative Radical SAM domain protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z462_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 88.0
  • Bit_score: 132
  • Evalue 2.90e-28
Putative Radical SAM domain protein {ECO:0000313|EMBL:CCM65475.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 88.0
  • Bit_score: 132
  • Evalue 4.00e-28
radical SAM domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 90.0
  • Bit_score: 100
  • Evalue 2.60e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Microthrix parvicella → Candidatus Microthrix → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 306
GTTCGCTCCCTGATCATCGTCGGGCTCGAGCCTGCCGAGGACACCCTCGCCGGGGTCGACTACCTCGCCTCGCTGGGCTGTGCGCCGGTCCTCAGCCCGTTCCGGCCCGCCGAGGGCACGCGCCTGCGCATCCTGCCGCCCCCGTCGGCAGCGCACCTCACCACCGTGCTCGAGGAGAGCCGGGCGATCGCCGCCCGCCACGGCGTCCCGCTCGGCCCCGACTGCGTCCCGTGCCAACACAACACGCTGACGTTCCCCTGGGACGGCTCGCCCTCGACGCCGTCGGCCACGGAACCGGCCGGATGA
PROTEIN sequence
Length: 102
VRSLIIVGLEPAEDTLAGVDYLASLGCAPVLSPFRPAEGTRLRILPPPSAAHLTTVLEESRAIAARHGVPLGPDCVPCQHNTLTFPWDGSPSTPSATEPAG*