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SCNpilot_expt_300_bf_UNK

In projects: SCNPILOT_EXPT_300_BF
Displaying items 23801-23850 of 24308 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_expt_300_bf_scaffold_21555
Species: Opisthorchis viverrini (100%)
1 1365 bp 29.45 4.23 21.76
SCNpilot_expt_300_bf_scaffold_38990 1 1311 bp 28.22 3.45 68.19
SCNpilot_expt_300_bf_scaffold_26800
Species: Chitinivibrio alkaliphilus (100%)
1 1141 bp 39.26 3.74 99.91
SCNpilot_expt_300_bf_scaffold_13612
Species: Adineta vaga (100%)
1 1832 bp 35.37 5.48 43.89
SCNpilot_expt_300_bf_scaffold_15428 1 1696 bp 36.26 4.14 37.68
SCNpilot_expt_300_bf_scaffold_20220
Species: Bradyrhizobiaceae bacterium SG-6C (100%)
1 1428 bp 62.96 5.80 93.70
SCNpilot_expt_300_bf_scaffold_20988 1 1390 bp 33.60 4.33 9.06
SCNpilot_expt_300_bf_scaffold_12524 1 1925 bp 28.52 2.87 6.55
SCNpilot_expt_300_bf_scaffold_24036 1 1262 bp 31.70 3.78 47.54
SCNpilot_expt_300_bf_scaffold_14108
Species: Xanthomonas axonopodis (100%)
1 1792 bp 60.60 3.36 99.78
SCNpilot_expt_300_bf_scaffold_14620
Species: Dictyostelium purpureum (100%)
1 1754 bp 33.30 3.86 14.54
SCNpilot_expt_300_bf_scaffold_25132 1 1214 bp 32.78 4.76 9.64
SCNpilot_expt_300_bf_scaffold_25644 1 1193 bp 30.09 3.37 36.46
SCNpilot_expt_300_bf_scaffold_25900
Species: Anas platyrhynchos (100%)
1 1182 bp 32.32 3.40 61.93
SCNpilot_expt_300_bf_scaffold_29412
Species: Sphingobacterium spiritivorum (100%)
1 1029 bp 31.39 1.95 99.71
SCNpilot_expt_300_bf_scaffold_23996
Species: Cerapachys biroi (100%)
1 1264 bp 33.62 3.18 48.42
SCNpilot_expt_300_bf_scaffold_28276 1 1075 bp 30.23 3.27 9.49
SCNpilot_expt_300_bf_scaffold_28788 1 1054 bp 35.77 3.57 24.19
SCNpilot_expt_300_bf_scaffold_21556 1 1365 bp 27.55 5.88 27.69
SCNpilot_expt_300_bf_scaffold_26801
Species: Gloeocapsa sp. PCC 73106 (100%)
1 1770 bp 32.82 4.82 47.97
SCNpilot_expt_300_bf_scaffold_15429
Species: Phytophthora ramorum (100%)
1 1696 bp 30.54 2.96 99.94
SCNpilot_expt_300_bf_scaffold_15685
Species: Hordeum vulgare (100%)
1 1679 bp 30.49 3.74 6.25
SCNpilot_expt_300_bf_scaffold_24549 1 1239 bp 30.67 3.85 22.03
SCNpilot_expt_300_bf_scaffold_22597
Species: Polysphondylium pallidum (100%)
1 1320 bp 33.18 3.42 56.59
SCNpilot_expt_300_bf_scaffold_25133
Species: Microbacterium hominis (100%)
1 1214 bp 73.23 3.72 99.84
SCNpilot_expt_300_bf_scaffold_25389
Species: Petromyzon marinus (100%)
1 1203 bp 35.83 2.50 47.63
SCNpilot_expt_300_bf_scaffold_25645
Species: Capitella teleta (100%)
1 1193 bp 38.31 2.52 99.83
SCNpilot_expt_300_bf_scaffold_25901 1 1182 bp 28.85 3.82 11.93
SCNpilot_expt_300_bf_scaffold_29925 1 1007 bp 33.07 2.49 99.80
SCNpilot_expt_300_bf_scaffold_27717 1 1099 bp 31.21 4.80 56.23
SCNpilot_expt_300_bf_scaffold_27973
Species: R_Betaproteobacteria_65_24 (100%)
1 1087 bp 63.39 4.16 99.91
SCNpilot_expt_300_bf_scaffold_23229
Species: Agrobacterium tumefaciens (100%)
1 1295 bp 63.63 3.88 99.85
SCNpilot_expt_300_bf_scaffold_23997
Species: Philodina roseola (100%)
1 1264 bp 32.75 3.38 76.90
SCNpilot_expt_300_bf_scaffold_34214 1 1580 bp 26.27 3.18 10.63
SCNpilot_expt_300_bf_scaffold_28533
Species: marine sediment metagenome (100%)
1 1064 bp 68.89 4.95 99.81
SCNpilot_expt_300_bf_scaffold_26546 1 1152 bp 29.34 4.36 14.32
SCNpilot_expt_300_bf_scaffold_26802
Species: Reticulomyxa filosa (100%)
1 1140 bp 27.46 4.18 97.11
SCNpilot_expt_300_bf_scaffold_19421
Species: Afipia felis (100%)
1 1470 bp 58.78 3.59 58.98
SCNpilot_expt_300_bf_scaffold_19677 1 1455 bp 27.97 5.87 15.88
SCNpilot_expt_300_bf_scaffold_7126
Species: Branchiostoma floridae (100%)
1 2647 bp 33.62 4.36 86.93
SCNpilot_expt_300_bf_scaffold_11150 1 2058 bp 31.97 3.29 6.85
SCNpilot_expt_300_bf_scaffold_15174 1 1713 bp 28.49 3.66 49.21
SCNpilot_expt_300_bf_scaffold_17198
Species: Microbacterium sp. C448 (100%)
1 1586 bp 73.52 3.80 95.33
SCNpilot_expt_300_bf_scaffold_20222 1 1427 bp 33.71 5.80 40.15
SCNpilot_expt_300_bf_scaffold_20478
Species: Haemonchus contortus (100%)
1 1415 bp 30.39 4.79 27.56
SCNpilot_expt_300_bf_scaffold_22598
Species: Afipia clevelandensis (100%)
1 1320 bp 62.95 2.66 100.00
SCNpilot_expt_300_bf_scaffold_14622
Species: Rhodopseudomonas palustris (100%)
1 1754 bp 62.26 5.72 99.89
SCNpilot_expt_300_bf_scaffold_29414
Species: Capitella teleta (100%)
1 1028 bp 32.68 4.15 30.93
SCNpilot_expt_300_bf_scaffold_29670 1 1018 bp 32.91 4.44 30.35
SCNpilot_expt_300_bf_scaffold_18182
Species: Stylonychia lemnae (100%)
1 1531 bp 31.35 2.95 99.93
Displaying items 23801-23850 of 24308 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.