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SCNpilot_expt_300_bf_scaffold_71_1

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_66_16

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 2..1879

Top 3 Functional Annotations

Value Algorithm Source
PKD domain containing protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GIE2_METPE similarity UNIREF
DB: UNIREF100
  • Identity: 37.8
  • Coverage: 357.0
  • Bit_score: 233
  • Evalue 7.30e-58
Cell surface protein {ECO:0000313|EMBL:AKB80284.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horo similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 652.0
  • Bit_score: 274
  • Evalue 5.20e-70
cell surface protein similarity KEGG
DB: KEGG
  • Identity: 35.9
  • Coverage: 555.0
  • Bit_score: 249
  • Evalue 2.10e-63

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Taxonomy

Methanosarcina horonobensis → Methanosarcina → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1878
TACGGCGACGGCTTCTCGACGGCCAAGACGGGCGGCAACTACATCTTCATTCGCCCGCAGATCTACAAGAACACGCAGGACGGCATCGACCTGCTGTACGCCGATGGCACCGGCAGCGTGACGGTGGACAGCGGCAATTTCGCCGATGACGCGGGCAATGACCTCAAGATCAGTGGCAGCGGCACGGTCACCAACAGCGTATTCGTCGCGAATTGCACGTGGTTCGGAGACAACGGCTATCCCGCCAAGGGTGACGATTGCCGCGCCGGCGGTGGCCTGTTGGGGGCCTTCAATGGCCCCAACCAGGTGCAGACGTGGGCCTACAACACCATGGTCGGCAACCCGAGCGGGATGTTCGTGGGGGATTCGACCAATGCGCAATCGAGCGACACCTACTATCTCTACAACAACATCTTCATCGCCGTGAACAAGAACGGCCAGCAGCCGTTCTTCACGTGGTTCGCGGATGGGTCCTACCCGGAAAAAGTGGTGTATGCCGGCAATCTGGTCTGGAACACCCGCAGCACGTCCTGCGACACCACCAGGATCATCTGCAAGGATCCGCAGCTCACGGACGAGTCGATGACATCGTTCAATCCCTACCCGCTGGTGAGCAGTCCGGCGATCGGCAATGCGGCGTCTGTCGGTACGCCCGTTGCGTATGACAACAACGGTAACCCGCGTCCGAGCCAGGGCGCCACCATCGGCGCGCTGGAATACCAGGGCGGTTCGTCGGGCACAGCCGGGGCGCCGAGCGCGAATTTTACCTACAGCGCTTCGGGGCTTGCGGTGAATTTCACCGATACCTCCACCGACACCGGCGGTACCATCGGTTCGTGGGCTTGGTCGTTCGGTGACGGCACAAGTTCGTCGGCGCAAAGTCCGAGCCATGCCTATGCCGCGGCGGGCACCTACCAGGTCGGGTTGACCGTGACCGACAAGGTCAGCGGCAAGACCTCGACGCGCACCGCACAAGTCGTGGTGGCGGCGCCGCAACCCGTTGGCGGTACGCCTTCGGCGAATTTCACCTACAGCACTTCCGGATTGACCGCGAGTTTCATTGACGCATCCACCGACAACGGCGGCAGCATTGGCTCGTGGGCGTGGTCGTTTGGTGACGGCACAAGTTCGTCGGCGCAGAGCCCGAGCCATGCCTACGCCGCGGCCGGCACCTATCAGGTCGGGTTGACCGTGACCGACAAGGTCAGTGGCAAGACCTCGACGCGCACCGCACAAGTCGTGGTGGCGGCGCCGCAACCGGTTGGCGGTACGCCTTCGGCGAATTTCACCTACAGCACTTCCGGATTGACTGCGAGTTTCATTGACGCATCCACCGACAACGGCGGCAGTATTGGTTCGTGGGCGTGGTCGTTCGGTGACGGCACAAGTTCGTCGGCGCAGAGCCCGAGCCATGCCTATGCCGCGGCGGGCACCTATCAGGTTGGTCTGACCGTGACCGACAAGGTCAGTGGCAAGACCTCGACGCGCACCGCGCAGGTGACGGTGACGGCGCCGCAACTGGGCGGTGGCACACCCAAGGCTGGTTTCACCTACAGCGTGTCAGGGATGACGGGCAATTTCACGGACAGGTCCACCGACAAGGGCGGCACCATCGATGCCTGGTCATGGTCGTTTGGTGACGGCACCAAGTCATCCGCCAGAAATCCGAGTCATGTCTACCGTAGCGCGGGTCATTACACGGTTACCCAGACGGTGCGGGACAAGGCCAGCGGGAAGACCTCCAGCATCAGTCGGGTCGTGCGTATCGCCAAACCCAGGGCCAGCGGGAAGACCTCCAGCATCAGTCGGGCCGTGCGTTTCGCCGAAACCAGGCTGTGTTTCTCCAGAGCCTGCTATTTGGAAAGGTCCAGGTGGTGA
PROTEIN sequence
Length: 626
YGDGFSTAKTGGNYIFIRPQIYKNTQDGIDLLYADGTGSVTVDSGNFADDAGNDLKISGSGTVTNSVFVANCTWFGDNGYPAKGDDCRAGGGLLGAFNGPNQVQTWAYNTMVGNPSGMFVGDSTNAQSSDTYYLYNNIFIAVNKNGQQPFFTWFADGSYPEKVVYAGNLVWNTRSTSCDTTRIICKDPQLTDESMTSFNPYPLVSSPAIGNAASVGTPVAYDNNGNPRPSQGATIGALEYQGGSSGTAGAPSANFTYSASGLAVNFTDTSTDTGGTIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVVVAAPQPVGGTPSANFTYSTSGLTASFIDASTDNGGSIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVVVAAPQPVGGTPSANFTYSTSGLTASFIDASTDNGGSIGSWAWSFGDGTSSSAQSPSHAYAAAGTYQVGLTVTDKVSGKTSTRTAQVTVTAPQLGGGTPKAGFTYSVSGMTGNFTDRSTDKGGTIDAWSWSFGDGTKSSARNPSHVYRSAGHYTVTQTVRDKASGKTSSISRVVRIAKPRASGKTSSISRAVRFAETRLCFSRACYLERSRW*