ggKbase home page

SCNpilot_expt_300_bf_scaffold_44_15

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_68_49

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: comp(20934..21311)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Dyella ginsengisoli RepID=UPI00034D49BB similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 81.0
  • Bit_score: 149
  • Evalue 1.60e-33
RNA polymerase subunit sigma-70 similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 148
  • Evalue 1.70e-33
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; X similarity UNIPROT
DB: UniProtKB
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 148
  • Evalue 8.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGAACAGCAAAGTCCACGAGCAACAGTCCGAAATCAAGGCGCTCATCGCCAAGGGCCTTGAGCAGGGCTACCTGACCTACGCCGAGATCAACGACCACCTCCCCGACGACATCGTCGACGCGGAGCAGATCGAGGACATCATGGCGGTGCTCAAGGGCGTCGGCATCGAAGTGCACGACGCCGCGCCGGACGCCGACCCGCTGGCCGACAATGCGCCGGGCAACACCGGCGACGACGAGGCACCGACCCGGTGCGCATGTACATGCGCGAGATGGGCACGGTCGAGCTGCTCACCCGCGAGGGCGAGATCGCCATCGCCAAGCGCATCGAGGAAGGCCTGTCCCAGGTGCAGCAGGCGCTGGCCAGCTTCCCGCTGA
PROTEIN sequence
Length: 126
MNSKVHEQQSEIKALIAKGLEQGYLTYAEINDHLPDDIVDAEQIEDIMAVLKGVGIEVHDAAPDADPLADNAPGNTGDDEAPTRCACTCARWARSSCSPARARSPSPSASRKACPRCSRRWPASR*