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SCNpilot_expt_300_bf_scaffold_1095_8

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_68_49

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 4564..8727

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 999.99
  • Bit_score: 2094
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 999.99
  • Bit_score: 2093
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WL14_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 999.99
  • Bit_score: 2094
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4164
ATGACCTACTCGTTTACCGAGAAGAAGCGCATCCGCAAGGATTTCGGCAAGCGGCCCCCCGTGCTGGGCGTGCCCAACCTGCTGACCATCCAGACCGATTCCTACCGGGAATTCCTGCAGGAGCACACCGCTCCGAAACAGCGCGAAGACAAGGGTCTGCACGCCGCCCTGAAGTCGGTGTTCCCGATCGTGAGCTACTCGGGCAACGCCGCACTGGAATACGTGGACTACCGCCTCGGCGAGCCGGGCTTCGACGAGCGCGAGTGCCGCAACCGCGGCATGACCTTCGGCGCGCCGCTGCGCGTGACCGTGCGCCTGGTGATCTACGACAAGGACAGCCCGGCCTCGCGCAAGGCCGTGAAGTACGTCAAGGAGCAGGAGGTCTACATGGGCGAGATCCCGCTCATGACCGACACCGGCACCTTCATCATCAACGGCACCGAGCGCGTCATCGTCTCGCAGCTGCACCGTTCGCCGGGCGTGTTCTTCGACCACGACCGCGGCAAGACGCACAGCTCGGGCAAGCTGCTGTTCTCCGCCCGCGTGATCCCCTACCGCGGCTCGTGGCTGGACTTCGAGTTCGACCCGAAGGACGCGCTGTTCACCCGCATCGACCGTCGCCGTAAGCTGCCGGTGACCGTGCTGCTGCGCGCGCTGGGCTACAGCAACCAGGAGATGCTGGCGATCTTCTTCGAGCACAACGTGTTCCACCTCGGCAAGAAGGGTGGCACCACGCTGGAGCTGGTCGCCGAGCGCCTGCGCGGCGAGACGCTGTCGTTCGACCTCGCGGTCGGCGGCAAGGTGCTGGTGGAAGCGGGCAAGCGCATCACCGCGCGCCACGTGCGCCAGCTCGCGTCCGAGAACATCACCGCGCTGGAAGTGCCGGACGACTACCCGGTGGGCCGCATCCTCGCCACCGACATCGTCGACGCGAAGACCGGCGAGCTGCTGGCCTCGGCGAACGACGAGATCACCGCCGAGCAGCTGGAGAACTTCCGCAAGGCCGGCATCGAAGTCGTGCCCACGCTGTACGTGAACGACCTCGACCGCGGCGCCTACATCTCGCACACGCTGCGCATCGACAACACCCGCACCCCGCTCGAGGCGCTGGTGGAGATCTACCGCATGATGCGTCCGGGCGAGCCGCCGACGAAGGACGCCGCGCAGAACCTGTTCTTCAACCTGTTCTTCACGTTCGACCGCTACGACCTGTCGGCGGTGGGCCGGATGAAGTTCAACCGCCGCGTGGGCCGCAAGGACATCCTGGGCCCGGGCGTGCTGTACGACCACAAGTACTTCGGCGAGCGCAAGGAAGAGGCCGCGCAGGCGCTGGTCAAGGCGCAGGGCGACACCTCCGACATCCTCGACGTGCTGAAGGTGCTGATCGACATCAAGAACGGCCACGGCACCGTGGACGACATCGACCACCTCGGCAACCGCCGCGTGCGTTCGGTGGGCGAGATGACCGAGAACACGTTCCGCATCGGCCTGGTGCGCGTGGAGCGCGCGGTGCGCGAGCGCCTGTCGCTGGCCGAGGCCGACGGACTCACGCCGCAGGACCTGATCAACGCGAAGCCGGTGGCGGCCGCGGTGAAGGAGTTCTTCGGTTCCTCGCAGCTTTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACGCACAAGCGCCGCGTCTCGGCGCTTGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTCGCCGTGTACGCGCGCACGAACCAGTACGGCTTCCTGGAGACGCCGTACCGCAAGGTCGCGAACGCCAAGGTCACCGACAAGGTGGACTACCTGTCGGCGATCGAGGAAGGCGACCACGTGATCGCGCAGGCGAACTCGCCGCTGGACAAGCACGGCGCCTTCGTCGAGGAATTCGTGTCCTGCCGTTTCCGCGGCGAGTCCGAACTGCGTCCGGCGGCCGAAGTCGACTACATGGACGTCTCTCCGATGCAGACCGTGTCGGTGGCGGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCGAACCGCGCGCTGATGGGCGCGAACATGCAGCGCCAGGCCGTGCCGACGCTGCGCTCGCAGACCCCGCTGGTGGGCACCGGCATCGAGCGCGCCGTGGCGCGCGACTCCGGCGTCACCGTCAGCGCGAAGCGCGGCGGCCTGATCGACCAGGTCGACGCCGGCCGCATCGTGGTGCGCGTGAACGAGGACGAGGTGGGCGAGAACGACGCCGGCGTCGACATCTACACGCTGACCAAGTACACCCGCTCCAACCAGAACACCAACCTCAACCAGCGTCCGCTGGTGAACGTGGGCGACGTGGTGGCGAAGGGCGACACGCTGGCGGACGGTTCCTCGACCGACCTCGGCGAGCTCGCGCTCGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCGATCCTGCTCTCCGAGCGCGTCGTGCAGGAAGACCGCTACACCTCGATCCACATCGAGGAGCTGGCCTGCGTCGCACGCGACACCAAGCTGGGCGCCGAGGAAATCACCGCCGACATCCCGAACGTGGGCGAGCAGGCGCTGGCCCGCCTCGACGAGAGCGGCATCGTCTACATCGGCGCCGAAGTGAAGGCGGGCGACATCCTGGTCGGCAAGGTCACGCCGAAGGGCGAGAGCCAGCTCACGCCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCCAGCGACGTGAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGCACCGTCATCGACGTGCAGGTGTTCACCCGCGACGGCATCGAGAAGGACAAGCGCGCGCGCCAGATCGAGGAAACCGAGGTCAAGCGCATCCGCAAGGACTTCGACGACCAGTTCCGCATCCTGGAAGGCGCGATCTACAACCGCATGCGCGTCCAGCTGGTCGGCCAGAGCGCGATGAGCGGTCCGGGCGGCCTGAAGCGCGGCACCGAGATCACCGACGCCTACCTCGACGGCCTGAAGAAGGACGACTGGTTCAAGATCAACGTCAAGGACGAGTCCGTCACCGAGTTCCTCGAGCGCGCGTCCGAGCAGGTCAAGCGCCACAAGGAGGAGTTCGACAAGCGCTTCAAGGAGAAGCAGGGCAAGATCACCCAGGGCGACGACCTCGCGCCGGGCGTGCTGAAGATGGTCAAGGTGTTCCTGGCCGTGGGGCGTGGTCTCCAACGTGGTGCCGGTCGAGGACATGCCGCACATGGCCGACGGCACGGCGGTGGACATCTGCCTGAACCCGCTGGGCGTGCCGAGCCGCATGAACATCGGCCAGATCCTGGAAGTGCATCTGGGCTGGGCGGCCAAGGGCCTGGGCAGGAAGATCCAGCAGATGATGGAGGCGCAGGCCAAGGTCAAGCAGATCCGCGAGTTCCTCGACCAGATCTACAACCACCACGTCGCCGGCGCCGTGCAGCACGTGGACCTCAAGTCGCTGACCGACGACGAGATCCTCGCGCTCGCGAACAACCTGCAACAGGGCGTGCCGATGGCCACGCCGGTGTTCGACGGCGCCGAGGAAACCGAGATCAAGGCGATGCTGAAGCTGGCGGATCTGCCCGAGTCGGGCCAGACCACGCTGTTCGACGGCCGCACCGGCGAGGCGTTCGATCGCCCGGTCACCGTGGGCTACATGCACTACCTGAAGCTCAACCACCTGGTCGACGACAAGATGCACGCCCGCTCCACCGGCCCGTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAAATGGAAGTCTGGGCGCTGGACGACGTGCAGGGCCGCAACCAGATGTACAAGAACATCGTCGACGGCAACCACGAGATGGCGGCCGGCATGCCGGAATCCTTCAACGTGCTGGTGAAGGAAATCCGCTCGCTGGGCATCGACATCGACCTGGAAGAGATCAAGTGAATGGTCGGGACCCGGGGCGATCCCCCGGGTCCCGGATAAGCCAGACCCCCGGTTATTCCGTGGCTCCCGACCATAGAGACAGCTCCAAGCGGAGACTCACATGA
PROTEIN sequence
Length: 1388
MTYSFTEKKRIRKDFGKRPPVLGVPNLLTIQTDSYREFLQEHTAPKQREDKGLHAALKSVFPIVSYSGNAALEYVDYRLGEPGFDERECRNRGMTFGAPLRVTVRLVIYDKDSPASRKAVKYVKEQEVYMGEIPLMTDTGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFSARVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYSNQEMLAIFFEHNVFHLGKKGGTTLELVAERLRGETLSFDLAVGGKVLVEAGKRITARHVRQLASENITALEVPDDYPVGRILATDIVDAKTGELLASANDEITAEQLENFRKAGIEVVPTLYVNDLDRGAYISHTLRIDNTRTPLEALVEIYRMMRPGEPPTKDAAQNLFFNLFFTFDRYDLSAVGRMKFNRRVGRKDILGPGVLYDHKYFGERKEEAAQALVKAQGDTSDILDVLKVLIDIKNGHGTVDDIDHLGNRRVRSVGEMTENTFRIGLVRVERAVRERLSLAEADGLTPQDLINAKPVAAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVYARTNQYGFLETPYRKVANAKVTDKVDYLSAIEEGDHVIAQANSPLDKHGAFVEEFVSCRFRGESELRPAAEVDYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRSQTPLVGTGIERAVARDSGVTVSAKRGGLIDQVDAGRIVVRVNEDEVGENDAGVDIYTLTKYTRSNQNTNLNQRPLVNVGDVVAKGDTLADGSSTDLGELALGQNMLIAFMPWNGYNFEDSILLSERVVQEDRYTSIHIEELACVARDTKLGAEEITADIPNVGEQALARLDESGIVYIGAEVKAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEETEVKRIRKDFDDQFRILEGAIYNRMRVQLVGQSAMSGPGGLKRGTEITDAYLDGLKKDDWFKINVKDESVTEFLERASEQVKRHKEEFDKRFKEKQGKITQGDDLAPGVLKMVKVFLAVGRGLQRGAGRGHAAHGRRHGGGHLPEPAGRAEPHEHRPDPGSASGLGGQGPGQEDPADDGGAGQGQADPRVPRPDLQPPRRRRRAARGPQVADRRRDPRAREQPATGRADGHAGVRRRRGNRDQGDAEAGGSARVGPDHAVRRPHRRGVRSPGHRGLHALPEAQPPGRRQDARPLHRPVLAGHPAAAGRQGAVRRPALRRNGSLGAGRRAGPQPDVQEHRRRQPRDGGRHAGILQRAGEGNPLAGHRHRPGRDQVNGRDPGRSPGSRISQTPGYSVAPDHRDSSKRRLT*