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SCNpilot_expt_300_bf_scaffold_1095_9

Organism: SCNPILOT_EXPT_300_BF_Xanthomonadales_68_49

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 8724..12938

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 999.99
  • Bit_score: 2583
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 999.99
  • Bit_score: 2583
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Dyella ginsengisoli RepID=UPI0003455CD3 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 999.99
  • Bit_score: 2579
  • Evalue 0.0
  • rbh

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4215
ATGAAAGACTTGCTCAATCTGTTCAACCAGCAGCGCGCCACGCCCGAGTTCGACGCGATCAAGATCGCGCTCGCCTCGCCGGAGCTGATCCGCTCCTGGTCCTACGGCGAAGTGAAGAAGCCGGAAACCATCAACTACCGCACGTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCGCGATCTTCGGTCCGGTGAAGGACTACGAGTGCCTGTGCGGCAAGTACAAGCGCATGAAGCACCGCGGCGTGGTCTGCGAGAAGTGCGGCACCGAGGTCACCCTGGCCAAGGTGCGCCGCGAGCGCATGGGCCACATCGAGCTGGCCAGCCCGACTGCGCACATCTGGTTCCTCAAGTCGCTGCCCTCGCGCATCGGCCTGATGCTGGACATGACCCTGCGCGACATCGAGCGCATCCTGTACTTTGAAGCCTTCGTGGTGATCGATCCGGGCCTGACCGCGCTGGAGCGCGGCCAGTTGCTCAGCGAGGACCAGTACCTCGAAGCGGTCGAGGAGCACGGCGACGAGTTCGACGCGCGCATGGGCGCCGAGGCGGTGTACGAGCTGCTGAAGTCGCTGGACCTGCCGGGCGAGATCATCCGCCTGAAGGAAGAGATCGCCTCCACCAACTCCGAGACCAAGCTGAAGCGCCTCACCAAGCGCGTGAAGCTGATCGAGGCGTTCGTCGAGTCCGGCAACAAGCCGGAGTGGATGGTGCTGACCGTGCTGCCGGTGCTGCCGCCGGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTCGCCACGTCCGACCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACAACCGCCTGCGCCGCCTGCTCGAACTCAACGCGCCCGACATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAGTCGGTGGACGCGCTGCTCGACAACGGCCGCCGCGGCCGTGCCATCACCGGCACGAACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGCGTGGACTACTCGGGCCGCTCGGTGATCACCGTGGGTCCGACGCTGCGCCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTGGAACTGTTCAAGCCCTTCATCTTCGCCAAGCTCCAGGCCCGCGGCGAGGCGACCACCATCAAGGCCGCCAAGAAGCTGGTCGAGCGCGAGGAAGGCCAGGTGTGGGACATCCTGGAAGAGGTGATCCGCGAGCATCCGGTGCTGCTGAACCGCGCGCCGACGCTGCACCGCCTCGGCATCCAGGCGTTCGAGCCGATCCTGATCGAAGGCAAGGCGATCCAGCTGCACCCGCTCGTGTGTACCGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCCGTGCACGTGCCGCTGTCGATCGAGGCGCAGCTGGAAGCGCGCGCCCTGATGATGTCGACGAACAACATCCTGTCGCCGGCGAACGGCGAGCCGATCATCGTGCCGACCCAGGACGTGGTGCTGGGCCTGTACTACATGACCCGCGAGCTGGTGAACGCGAAGGGCACCGGCATGGTGTTCTCCGGCATCAGCGAGGTGCGCCGCGCCTACGACAACCGCGCGGTCGAGTTGCACGCGAAGATCAAGGTACGCCTGAAGCAGGTGCGCGTGGACGAGCACGGCGAGCGCCACAGCGAGCTCTCGCTGGTCGAGACCACCGTGGGTCGCGCGCTGCTGGCCGAGATCCTGCCGGAAGGCCTGCCGTTCCAGCTCGCCAACACCGAGCTGACCAAGAAGGCCATCTCGCGCCTGATCAACGCCAGCTACCGCCGCCTGGGCCTCAAGGAAACGGTGATCTTCGCCGACAAGCTGATGTACACCGGCTACCGTTTCGCGACGCGCGCCGGCATCTCCATCGGCATCGACGACATGAAGATCCCGGCCGAGAAGAAGGCGATCCTCGAGGAAGCCGAGAAGGAAGTCGTCGAGATCCAGCAGCAGTACCAGTCGGGCCTGGTGACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACCAACGAGCTGGTGGCCAAGGCGATGATCGACGGCATCGGCACCGAGACGGTGACCGACGCCGACGGCAAGCAGGTCGCCCAGAAGTCGATGAACTCGCTGTACATCATGGCCGACTCCGGCGCCCGTGGTTCGGTGGCGCAGATCCGCCAGCTCGCCGGCATGCGCGGCCTGATGGCGCGTCCGGACGGCTCGATCATCGAGACCCCCATCAAGGCCAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCAACTCCACCCACGGCGCCCGCAAGGGCCTGGCGGATACGGCGCTGAAGACCGCGAACTCCGGTTACCTCACCCGCCGCCTCGTGGACGTGGCGCAGGACGTGGTGGTCACCATGGACGACTGCGGCACCGAGGAAGGCCTGATCATGCAGCCGATCGTGGAAGGCGGCGACGTGGTCGAGCCGCTGCGCGAGCGCGTGCTGGGCCGCGTGGTGGTCGAGGACGTCTACGCCCCCGGCAACGACGACCAGCCCATCGTCGAGCGCGACACCCTGCTCAACGAGGCGCTGGTGGAGAAGCTGGACAAGGCCGGCGTGCAGTCGATCAAGGTGCGTTCGCCGATCACCTGCGCCGCCAGCCACGGCGTGTGCAAGCTGTGCTACGGCCGCGACCTGGCCCGTGGCCACCTGGTGAACATGGGCGAGGCCGTGGGCGTGGTCGCCGCGCAGTCGATCGGCGAGCCCGGCACCCAGCTGACCATGCGTACCTTCCACATCGGCGGCGCGGCTTCGCGTGCGGCCGCGGTGGACAACGTGACGGTGAAGACCACCGGCACGCTGAAGTTCAACAACATCAAGACCGTGCAGCACGCGCAGGGCCACCTGGTGGCGGTGTCGCGTTCGGGCGAAGTGTCGGTGCTGGATACCAGCGGCCGCGAGCGCGAGCGCTACAAGGTGCCGTACGGCGCCACCATCGCGGTGAAGGACGGCGCCGCGGTCAAGGCCGGCCAGGCCGTGGCCAACTGGGACCCGCACACCCATCCGATCGTGTCGGAAGTGGCCGGTACCGTGCGCTTCATCGACTTCATCGACGGCGTCACCGTGCAGAGCCAGACCGACGAACTGACCGGCTTGGAATCCGCGGTGGTGACCGATCCGAAGCGTCGCGGCACGGCCGCCAAGGACCTGCGTCCCATCGTGCGCCTGGAAGACGCCAAGGGCCGCGAGCTGAAGCTGCCGGGCACCGACGTGCCGGCGCAGTACATGCTGCCGGCCGGTGCCCTGGTGTCGATCCAGAACGGTGCGGCGGTGGGCGTGGGCGACGTGGTGGCGCGTATCCCGCAGGACGCCTCCAAGACCCGCGACATCACCGGCGGTCTGCCCCGCGTGGCCGACCTGTTCGAGGCGCGCAAGCCGAAGGAGCCGGCGATCCTGGCCGAGCGTTCGGGCGTGATCAGTTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGATCATCAAGGACGCCGACGGCAACGAGCACGAGGAGCTGATCCCGAAGTGGCGCCAGGTCATCGTGTTCGAAGGCGAGCACGTGGAGAAGGGCGAGACGGTGGTGGACGGCGAGCCCAGCCCGCACGACATCCTGCGCCTGCTGGGCGTGGAGCCGCTGGCCGGCTACCTGGTCAAGGAAATCCAGGACGTCTACCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAAGCGATCATTCGCCAGATGCTGCGCAAGGTCGAGATCACCGAGCCGGGCGACAGCCACTACCTGCGCGGCGAGCAGGTGGAGCGCGTGCGCATCAACGCCGAGAACGATCGCGCGGTGAGCAAGGGCGAGCGTCCGGCCGAGTACCAGTCGGTGCTGCTCGGCATCACCAAGGCATCGCTGGCCACCGAGTCGTTCATCTCGGCGGCCTCGTTCCAGGAGACCACCCGCGTCCTCACCGAGGCGGCGGTCCGTGGCACGCGCGATACCTTGCGGGGCCTGAAGGAAAATGTTATCGTCGGACGTCTGATTCCCGCGGGTACCGGCCTGGCGTATCACGCCTCGCGTCGCGGTCAGGGCGGCCTGACCGCCTCGGAGTTGCAGACGCTTTCCGGTACCGCTTCCGCCGTCTCGTTCGCCGAGGCGCCGGCCGGTAGTGAAAGTGGCGTCGAGTAA
PROTEIN sequence
Length: 1405
MKDLLNLFNQQRATPEFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAAIFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSLPSRIGLMLDMTLRDIERILYFEAFVVIDPGLTALERGQLLSEDQYLEAVEEHGDEFDARMGAEAVYELLKSLDLPGEIIRLKEEIASTNSETKLKRLTKRVKLIEAFVESGNKPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQESVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEGQVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEARALMMSTNNILSPANGEPIIVPTQDVVLGLYYMTRELVNAKGTGMVFSGISEVRRAYDNRAVELHAKIKVRLKQVRVDEHGERHSELSLVETTVGRALLAEILPEGLPFQLANTELTKKAISRLINASYRRLGLKETVIFADKLMYTGYRFATRAGISIGIDDMKIPAEKKAILEEAEKEVVEIQQQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTETVTDADGKQVAQKSMNSLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDVVVTMDDCGTEEGLIMQPIVEGGDVVEPLRERVLGRVVVEDVYAPGNDDQPIVERDTLLNEALVEKLDKAGVQSIKVRSPITCAASHGVCKLCYGRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLKFNNIKTVQHAQGHLVAVSRSGEVSVLDTSGRERERYKVPYGATIAVKDGAAVKAGQAVANWDPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTAAKDLRPIVRLEDAKGRELKLPGTDVPAQYMLPAGALVSIQNGAAVGVGDVVARIPQDASKTRDITGGLPRVADLFEARKPKEPAILAERSGVISFGKDTKGKQRLIIKDADGNEHEELIPKWRQVIVFEGEHVEKGETVVDGEPSPHDILRLLGVEPLAGYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKVEITEPGDSHYLRGEQVERVRINAENDRAVSKGERPAEYQSVLLGITKASLATESFISAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHASRRGQGGLTASELQTLSGTASAVSFAEAPAGSESGVE*