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SCNpilot_expt_300_bf_scaffold_387_17

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(20636..21196)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma24 n=1 Tax=Omnitrophica bacterium SCGC AAA257-O07 RepID=UPI0003B46920 similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 178.0
  • Bit_score: 121
  • Evalue 7.10e-25
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 72.8
  • Coverage: 184.0
  • Bit_score: 267
  • Evalue 2.90e-69
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AIE87871.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 72.8
  • Coverage: 184.0
  • Bit_score: 267
  • Evalue 1.50e-68

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
TTGTCAGCCGTAATCGAGAAAACACGGAACGAAGCGTTTGACGAGGACCTCATCCTCGTTGAGCGGCACCTCACCGGAGATGCCGCCGCTTTCGAGTTGATCTACCGCAAATACTATGACAAGGTCTTTGCCATTGCTCGTGGTGTGTTAATGGACGCTGACGAAGCGGCCGACGCGGTTCAAGAAGTCTTCACGCTGGTATACCGCCACATCTCTCGATTTGACCGACGCTCCAAGTTCAGCACCTGGCTCTTCCGTATCGCCGTTAACCGGAGCATTCAGGAGGCCAGAAAGCACCGCCACCGTCATCGAAACGTGGAGCTCACCGAAGCCGCTGGCAAGGAAGCTCCGGTCGAGACTGAGGAAATGGATCCAAGGGTCCAAGCTTCGTTGGCCCAACTGGCTCCGCAGGACCGCGCCCTGCTTACATTGTTCTACTGGGAAGAGCTCAGCCTGAACGAAATCGCCGATAGCATTGGTTGCAACGTGAACGCCGCCAAAACCCGCCTCTATCGAGCCCGCGAGCGATTCCGATCTCATTATGAGGAGGAAATCTCGTGA
PROTEIN sequence
Length: 187
LSAVIEKTRNEAFDEDLILVERHLTGDAAAFELIYRKYYDKVFAIARGVLMDADEAADAVQEVFTLVYRHISRFDRRSKFSTWLFRIAVNRSIQEARKHRHRHRNVELTEAAGKEAPVETEEMDPRVQASLAQLAPQDRALLTLFYWEELSLNEIADSIGCNVNAAKTRLYRARERFRSHYEEEIS*