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SCNpilot_expt_300_bf_scaffold_392_12

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 13599..13985

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=661478 species="Bacteria; Armat similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 97.0
  • Bit_score: 125
  • Evalue 4.70e-26
Shikimate dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XHS0_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 123.0
  • Bit_score: 79
  • Evalue 2.80e-12
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 97.0
  • Bit_score: 125
  • Evalue 9.50e-27

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 387
ATGCACCAGGCCGCCTATGACGCCTTGAAATTGCCTTATCGGTATGTGGCCGTCCATGTCGGACGTGGTTCAGTTGGAAAGGCGCTTGATCGATTGGCTGCCTTGGGTTACCGTGGGGTGAACGTGACGGTACCGCACAAGGAAGAGGCGCTGGCTTGGGCGGCTCAGGCGGACGAACTCAGCCGTCGAATTGGAGCGGCCAACACACTTCGGCTGGCGACCAAGGAAGCGACCAACACGGACGCGGGCGGATTTTTGGACACGATTCAGGGCTTGGCGGGGCGAGAGGCGACGATGCTNNNNNNNNNNNNNNNNNGGTCCGAGTTTGGAATCGGACTCGGGAGCGGGCAATGGCCTTGGCGGATGAGTTTGGATTGTCGGTGCTAG
PROTEIN sequence
Length: 129
MHQAAYDALKLPYRYVAVHVGRGSVGKALDRLAALGYRGVNVTVPHKEEALAWAAQADELSRRIGAANTLRLATKEATNTDAGGFLDTIQGLAGREATMXXXXXXXSEFGIGLGSGQWPWRMSLDCRC*