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SCNpilot_expt_300_bf_scaffold_392_13

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 13949..14257

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=661478 species="Bacteria; Armat similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 99.0
  • Bit_score: 103
  • Evalue 2.00e-19
Shikimate dehydrogenase n=1 Tax=Selenomonas sp. oral taxon 138 str. F0429 RepID=L1NEX4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 90.0
  • Bit_score: 76
  • Evalue 2.40e-11
shikimate 5-dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 53.5
  • Coverage: 99.0
  • Bit_score: 103
  • Evalue 4.00e-20

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 309
ATGGCCTTGGCGGATGAGTTTGGATTGTCGGTGCTAGAAGAACCTACGGTGGACGCGGATTTGGTGGTGAATACGACCTCGGCGGGCCTTCATGGGGATCGATTACCCCTGGATTGGTCAGAGGCAAGGAACGGAACGGTGGCTTACGACTTGGTGTACGGCGAAACTCCTTTTCTGACTGAGGCGGCGGCGCGAGGGTTGCGAACGATTGACGGGCAATCCCTCTTGGTGGCCCAAGGCGCTCGGTCCTTTGAGTGGTGGCTAGGGTTGACGCCATCCCGCGAAGCGATGGCGGAGGCGATTCGTTGA
PROTEIN sequence
Length: 103
MALADEFGLSVLEEPTVDADLVVNTTSAGLHGDRLPLDWSEARNGTVAYDLVYGETPFLTEAAARGLRTIDGQSLLVAQGARSFEWWLGLTPSREAMAEAIR*