ggKbase home page

SCNpilot_expt_300_bf_scaffold_352_23

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 22822..23226

Top 3 Functional Annotations

Value Algorithm Source
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EV85_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 134.0
  • Bit_score: 196
  • Evalue 2.10e-47
response regulator similarity KEGG
DB: KEGG
  • Identity: 88.9
  • Coverage: 135.0
  • Bit_score: 248
  • Evalue 7.80e-64
Response regulator {ECO:0000313|EMBL:AIE86855.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisol similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 135.0
  • Bit_score: 248
  • Evalue 3.90e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 405
ATGCCCCTGAAAGTTTTGGTCTGTGACGACGAGAGACACATCGTCCGGCTTATCCAAGTCAATTTGGAGCGGCAAGGCTACCAAGTTGTCACCGCGTTTGATGGAAAAGAAGGATTGGAAAAGATTCGATCAGAAAAACCAAATCTGGTCGTCCTCGACGTCATGATGCCTTACATGGACGGATTTGAGGTCTTGAAGAACCTGCGCCGCGAACCAGAGACGGAATCACTTCCGGTCATCATGCTTACCGCTAAGGCCCAGGACAAGGACGTGTTTGAGGGCTATCACTATGGCGCTGACATGTACCTAACCAAGCCTTTCAATCCGATGGAATTGGTCACTTTCGTGAAGCGTATTGCGCAAGGGAACGACGATCCTGGCGGCCCTAAGCGATACGACCTGTAA
PROTEIN sequence
Length: 135
MPLKVLVCDDERHIVRLIQVNLERQGYQVVTAFDGKEGLEKIRSEKPNLVVLDVMMPYMDGFEVLKNLRREPETESLPVIMLTAKAQDKDVFEGYHYGADMYLTKPFNPMELVTFVKRIAQGNDDPGGPKRYDL*