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SCNpilot_expt_300_bf_scaffold_442_22

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 22439..22999

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily protein n=1 Tax=mine drainage metagenome RepID=E6PFB2_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.2
  • Coverage: 176.0
  • Bit_score: 119
  • Evalue 4.60e-24
RNA polymerase, sigma-24 subunit, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 242
  • Evalue 1.00e-61
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AIE86201.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 162.0
  • Bit_score: 242
  • Evalue 5.00e-61

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGAAAACCGGAAAGATCCTCTGCTGGGAGGGACATCTCATCCAGCGAGCGTCGCGAGGCGAGTCGGTCGCCTTCGAACTCATATCGGATCTCTACCGACCCATTCTTCTGAACCTCGCAATGCGCATTTTGCGCAACGCAGATGATGCAAATGATGCAGTACAGGAAAGCTTGGTTAAGGCATATCGAGCGATTAGGGACTTTGACCCGAATCGTCCGATTAAGCCGTGGCTCTGCCGGATCTGCACTAACGTTTGTATCGATATGGTGCGAAGCCGAAAGTACGAGGGCGATTCGATCGATCAGCATGAATATATGCTGTGCGACGAGTCGAGCAGCTTAGAAGACCAAGCGGGCGCGAACATGGCGCGCACTCAGGTGATCGAAGCGATATCCCGACTGCCCGAGAAGTATAGAAAGATCATCTTTCTGCGTCACTTCCGGCATATGGATATCAACGAGATTGCCATTGAGCTTCAAAAACCCGAAGGCACGATCAAAAGTTGGCTCTTTCGAGCCAGAGGCTTACTCAAGCAAGATTTGACGATGGCAACAGGGTAG
PROTEIN sequence
Length: 187
MKTGKILCWEGHLIQRASRGESVAFELISDLYRPILLNLAMRILRNADDANDAVQESLVKAYRAIRDFDPNRPIKPWLCRICTNVCIDMVRSRKYEGDSIDQHEYMLCDESSSLEDQAGANMARTQVIEAISRLPEKYRKIIFLRHFRHMDINEIAIELQKPEGTIKSWLFRARGLLKQDLTMATG*