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SCNpilot_expt_300_bf_scaffold_1084_1

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 2..583

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=404589 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 30.6
  • Coverage: 193.0
  • Bit_score: 79
  • Evalue 5.80e-12
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00037BB1B4 similarity UNIREF
DB: UNIREF100
  • Identity: 28.6
  • Coverage: 192.0
  • Bit_score: 87
  • Evalue 1.20e-14
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 193.0
  • Bit_score: 79
  • Evalue 1.20e-12

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Taxonomy

Anaeromyxobacter sp. Fw109-5 → Anaeromyxobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATCTTGAATCGAACCTTTGTGGGGGTGCGAGTTCCCGCCGATCAACTTGCGATGATTCAAGAGAAGGTGCAACTGATCAAAAGAAAACCGGGAGTAGAAAATGTCCGCTGGAACGCCCCCTCGGAACTCCTGTTGAACCTCGCCAGTCTCGGCGAACTTGAATTGGGCACCCTTCAAGCCCTCAAGCCGGTCCTCCATCAAGCCGCCGCCATAAGTCCACCCATGAACCTTGAGATCAAGGGCTTCGGTGGACTCCCCAATCTGATCCAACCGCGCTATCTGTATGCCGGAATCGAAGGCGAAGATGCCCAGTGGCTGCCACCCCTTGTTCAAAGAATCAATCAGACCACCCAGCCGCTGACCCCGCATCGAGAAATCAAGGAGTTCAAAGCCCACATCCTGCTCGGTCGCCTGAAAACCGAGAACGAACAGTATCGTGTTGGACTAGGAAGGGCCCTCAAACTTGCCGAACAACCCGTCATCGGTCCTTGGCGGATCGATCACATCGAGCTATTGATCAGCTCGGCCAGCGAGAGCGGAATTGGCTACACCGTCGTGGAAATGATCCCACTCGGTGGTTAA
PROTEIN sequence
Length: 194
ILNRTFVGVRVPADQLAMIQEKVQLIKRKPGVENVRWNAPSELLLNLASLGELELGTLQALKPVLHQAAAISPPMNLEIKGFGGLPNLIQPRYLYAGIEGEDAQWLPPLVQRINQTTQPLTPHREIKEFKAHILLGRLKTENEQYRVGLGRALKLAEQPVIGPWRIDHIELLISSASESGIGYTVVEMIPLGG*