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SCNpilot_expt_300_bf_scaffold_3010_1

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: 3..635

Top 3 Functional Annotations

Value Algorithm Source
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimon similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 1.50e-85
tRNA-dihydrouridine synthase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EYJ8_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 198.0
  • Bit_score: 186
  • Evalue 2.00e-44
putative TIM-barrel protein, nifR3 family similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 202.0
  • Bit_score: 324
  • Evalue 3.00e-86

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 633
GTCACAGTTAAGGTTCGAGCGGGGTGGGACTATTCCCTCTTTGCCGCCCCCGATCTGGCCAAGCGGTTCCAAGATGCAGGGGCGAAAATGATTACGCTCCATGCTCGGTTCGCCAAGCAAGGATTTGAGGGTGAAGCGGACTGGAAACTGATTCGCGACATGCGCGAAGCGGTTCAGGTGCCTCTGATTGGCAATGGCGATGTCAAGGCTCCCGGTGATGCTGTTCGGATGATGGAAGAGACAGGATGCGACGGGGTGATGGTCGGGCGAGCGGCCATCTCAAATCCTTGGGCCCTTCGCGACATCTCCTTGGCCATGCGCGGACTGCCTGTCGGTCCGCCGCCAACTCTCGACGAACGGATTCAGGTCGCCCTAGAGCATCTGCGAATGATGATCGCCTGTGAATGCGACGCCGAATCGTTTGAAGAAGCTCTGACCTTGCCCAACTATGCGGATGGCGAGTTACGGGCCTGCCGCGGCCTCCGAGGTCAAATACCGCTTTACATCAAGGGCGAGTTTGGCGCGTCAGCAATTCGTGATCGGTTAACCAAGTGCTCCACAATTGGCGACTACGAGCACGTTCTTTTTGAGTTTCAAGTTCAGACTCGTGAGCACCGCTCAGTGGTCGCCTAG
PROTEIN sequence
Length: 211
VTVKVRAGWDYSLFAAPDLAKRFQDAGAKMITLHARFAKQGFEGEADWKLIRDMREAVQVPLIGNGDVKAPGDAVRMMEETGCDGVMVGRAAISNPWALRDISLAMRGLPVGPPPTLDERIQVALEHLRMMIACECDAESFEEALTLPNYADGELRACRGLRGQIPLYIKGEFGASAIRDRLTKCSTIGDYEHVLFEFQVQTREHRSVVA*