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SCNpilot_expt_300_bf_scaffold_12948_7

Organism: SCNPILOT_EXPT_300_BF_Armatimonadetes_55_9

near complete RP 49 / 55 MC: 19 BSCG 47 / 51 MC: 1 ASCG 13 / 38
Location: comp(4538..5062)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor sigW similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 119.0
  • Bit_score: 151
  • Evalue 2.90e-34
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:AIE87989.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimon similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 119.0
  • Bit_score: 151
  • Evalue 1.40e-33
ECF subfamily RNA polymerase sigma-70 factor id=3266482 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 35.6
  • Coverage: 118.0
  • Bit_score: 65
  • Evalue 5.60e-08

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Taxonomy

Fimbriimonas ginsengisoli → Fimbriimonas → Fimbriimonadales → Fimbriimonadia → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 525
ATGCGCTCGTCTTCTCTATGCCTAATGACGCAATGCGAGACTCACTGGCCGAAAAGCGCTGGCTCACCGCCCTTTCACAGGGCGATCCCCAAGCGCTTGGCGGACTGTATGAAATGTACGGAGAAAGAATTTTCCGATACACGTTTCGCATGCTCGGCAACCGAACGGATGCGGAAGACGCGACTGCAGAGACGTTCCTGCGGGTACTCCGCCGCTCAGCGGAGTTGCGTGCCGACGGCGCCTTTCGACAAAATGCGGCAGCACAAACTCATGGAGCTGCCCTCAGACGCGCACTACTCAGGTTCGGAGGAAAGAGCTGCTCTGCGGGTAACCGTGCAGCAAGCCCTCGCGGATCTGCCGATGGAATATAGAGAGCCGTTGGTCCTCTGTGATTTAGAGGATATGGCGGCCCGTGAAGCGGCGGAGATTTTGAAAATAAGCGTTCCTGCGCTTAAATCAAGGCTATACAGAGGACGTAGAGCCCTCCGCGACAAGCTGGGTGGAACCCTAGAGAGGACGTCGTGA
PROTEIN sequence
Length: 175
MRSSSLCLMTQCETHWPKSAGSPPFHRAIPKRLADCMKCTEKEFSDTRFACSATERMRKTRLQRRSCGYSAAQRSCVPTAPFDKMRQHKLMELPSDAHYSGSEERAALRVTVQQALADLPMEYREPLVLCDLEDMAAREAAEILKISVPALKSRLYRGRRALRDKLGGTLERTS*