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SCNpilot_expt_300_bf_scaffold_1580_2

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2348..2932

Top 3 Functional Annotations

Value Algorithm Source
Metalloendopeptidase {ECO:0000256|RuleBase:RU361183}; EC=3.4.24.- {ECO:0000256|RuleBase:RU361183};; TaxID=6238 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 172
  • Evalue 5.10e-40
Protein CBR-NAS-13 n=1 Tax=Caenorhabditis briggsae RepID=A8X498_CAEBR similarity UNIREF
DB: UNIREF100
  • Identity: 47.2
  • Coverage: 178.0
  • Bit_score: 172
  • Evalue 3.60e-40
Astacin (Peptidase family M12A) similarity KEGG
DB: KEGG
  • Identity: 42.6
  • Coverage: 155.0
  • Bit_score: 117
  • Evalue 5.10e-24

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Taxonomy

Caenorhabditis briggsae → Caenorhabditis → Rhabditida → Chromadorea → Nematoda → Metazoa

Sequences

DNA sequence
Length: 585
ATGCAAAAAATGGAACGACTCATTTCGATGAATAATCATAAATGTATTCAATTTCGACCGAAAAACGCATCGGATATCTATTATATTACAATTATCAATGGATATGGTTGCTATTCATATGTCGGGCAAAATACCGGTATTTCAATGGTGCGTGAAGTCAGTTTGCAACATCCAGGATGCCTTTATGAAGCAATTATTATGCATGAATTACTTCATACATTGGGTTTTTTTCATGAACAATCTCGACCTGATCGGGATTCATATGTTCGAGTTAATTACGCGAACATTTGGCCAGGTTATGGAAGTAATTTTGATAAATATAACAACACGGTCGTCGACACACTGAATACACCATATGACTATACATCAGTGATGCATTATGAACCAGGGGCATTTTCTTCTAACGGCTTACCAACGATTGAACCATTACAAGCTGGTGCTAAGATAGGACAACGTCGTAATATGAGTACAATTGATATTGAAGAAGTGCGAATACTTTATAATTGTTCAGCATCTGGACAAACACTTCCACCGATTTCAACAACAACAACAGGTTTGTTTAGGTTCTATTTGCTTTATATTTAA
PROTEIN sequence
Length: 195
MQKMERLISMNNHKCIQFRPKNASDIYYITIINGYGCYSYVGQNTGISMVREVSLQHPGCLYEAIIMHELLHTLGFFHEQSRPDRDSYVRVNYANIWPGYGSNFDKYNNTVVDTLNTPYDYTSVMHYEPGAFSSNGLPTIEPLQAGAKIGQRRNMSTIDIEEVRILYNCSASGQTLPPISTTTTGLFRFYLLYI*