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SCNpilot_expt_300_bf_scaffold_1465_6

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2564..2914

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: rho guanine nucleotide exchange factor 12 n=1 Tax=Latimeria chalumnae RepID=UPI0003C12DED similarity UNIREF
DB: UNIREF100
  • Identity: 37.0
  • Coverage: 100.0
  • Bit_score: 73
  • Evalue 1.80e-10
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000010515}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.0
  • Coverage: 100.0
  • Bit_score: 73
  • Evalue 2.50e-10
LBC oncogene, putative similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 90.0
  • Bit_score: 71
  • Evalue 1.60e-10

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Taxonomy

Latimeria chalumnae → Latimeria → Coelacanthiformes → Chordata → Metazoa

Sequences

DNA sequence
Length: 351
ATGAAAAATTTTTCAAATTTTGTTAAGCAATGCGAAGCGAATCCTTTGTGTCGTCGTTTAACATTGAAAGACTATCTTCCATCGATAATGACACGTTTCACCAAATTAAAAATGCTATTCGAAGCAATGAGAAAATTCGTTGCTGATGATGAAATCGAAAGTCAAAAACTCAGCAAATGTGTCGATTGCGCTGACAATATCTTGAAATCTATGAATCATGCACGTCGACGAAAAGAACAAGAAGCTTTACTCAAACAAATCAAAGCTAACCTCGATATACAAATACCTAATGATGATAAATCAATTAATATTGCCAATCTTCTAGTAAATTATTCAAGCAAAAATTTCTAA
PROTEIN sequence
Length: 117
MKNFSNFVKQCEANPLCRRLTLKDYLPSIMTRFTKLKMLFEAMRKFVADDEIESQKLSKCVDCADNILKSMNHARRRKEQEALLKQIKANLDIQIPNDDKSINIANLLVNYSSKNF*