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SCNpilot_expt_300_bf_scaffold_2136_1

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(2..1780)

Top 3 Functional Annotations

Value Algorithm Source
Nuclear receptor coactivator 1 n=1 Tax=Crassostrea gigas RepID=K1QHN7_CRAGI similarity UNIREF
DB: UNIREF100
  • Identity: 27.9
  • Coverage: 603.0
  • Bit_score: 137
  • Evalue 3.90e-29
Nuclear receptor coactivator 1 {ECO:0000313|EMBL:EKC33363.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea. similarity UNIPROT
DB: UniProtKB
  • Identity: 27.9
  • Coverage: 603.0
  • Bit_score: 137
  • Evalue 5.50e-29

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Taxonomy

Crassostrea gigas → Crassostrea → Ostreoida → Pteriomorphia → Mollusca → Metazoa

Sequences

DNA sequence
Length: 1779
TTGTACAATTGTGTACATCCGAGTGATGTTGGCGAGTTTAGCAAGGCTTGGGCGAAGAAAGATGCCGGTAGGAGGTTTTTTTTATTCTTGTCGTTTACTGAAAACTCGTTCGTCATTCAAGGTGATTTGTCATCTTCAACAGCGAATTCTGATCAATCAACTAGTTCATCACGTGGTTTGACATTTCTCTGTCGTATGCGAGCAAATGATGATAGTGCACCGTATGTGCCCATGATCGTGTCCGTTGCTTTGCATCGTGATACATCAGGCAGTGAGAAAACATTTCTAATTTGTATTGCACGACGACCACCGGTTAACGAACTAAAAGACAAGCCAGCTCTGCTTGGTTTCGATCAATTCTCTTCTCGAATTAATCTACAATATGATATCGAAAGTCTTGATTCAAGTCATATGAAATGTGAAACATTGGATATGAATTATGCGGGCAAAAATTTTCGAGATTATGTTCATATCAGTGATATTCCATTGATAGATAGACATTTTCAAGAAGTCATCGAAAAGACTGAATCGAAAAGTTCAATCTATCGATTTCGTCTTCATGATGATATTTATGCATTTGTCAATACTCAGAGTAAACTATTTTCATCAACAAATCAAACTGATTCAATTCTTTCGACACATACAATCGTTCGTTTAATCGATAATATCAATGATTTAAATGGTACGGCATCGACACGTCTCATGAAATCCATCATCACATCGAATCGAGATTTACAAAAAAACAAACCATCGCCACCACCACCACAACCACAACAACAAATGTCAACAAATCGAGCTCTTCCAACACCATCGCCGACTGCAACACCACCTATAGGCACACAATTTGCATTGACTATGTTAGGCATGCATAAGAATGCGTCGAATTCATTGCAACAACATGTCTCAAGCACATTAGGAACATTGATTCAAGTACAGAATTCTCTATCTAGTCCAAATGATAAATCCCAACAACAACAACAACAACAAATGAATCCACCATTATCACCACCACGAACAAACCTACAGAAATCCTTATTACTTGATAATGTTTCGTCAACTGATACAGTTGAATTCGGCAGTAAACGAACATCATTTAGTCCATCATTAAATTCAATCCATTCTCAACACGGAACAATGCCATCGCCAATGAATCCATTCGATTTACTTTTCACGCCTATTTCACCATCGAATGATCTCGCCACATTCTTACCAACATCCTCACCATCGACAAACAAAACCTCGAATTCACCTTTGTCTTTAGTCGATCCAACCGCATTGCTTTTCTCGAATCATGATATTTACACGACAACCTCGAGTCCTCAACCAGCTCCACAAACACCCACATTACCTTTGAGCAATCAATCGCGTAGTTCAACTCGTCTTCGACAATTACTAACAACGAAATCACCATCAGCTTCGCCGAGTCCACATTACCTTCAAGATACTCGACCGCATTCGAACACATTCGATGATTTTATTCAAGCTGCTGAAAGTCCAACAACAACACATGTATCACCGTTATCGAATGATCTTCCATCGCCAAATCGACGTCGACGAAATCACAGTCAAACAAACGGTGGCAATTCGGCCGATCTCCTGCTCAAACAAATCCTCGGACGACATACACCGTTGACAACAACGACGAATACGAATGAAAATCTAACATTAGAAAATCAACTGTCATGGTCATCGCCGAATTCAGCATTGGGCATTAAAACCGAATCGAATATGAGCGATGAAAATGCGGCGACAACGCCCGGTTCAACGACGAAATTACGC
PROTEIN sequence
Length: 593
LYNCVHPSDVGEFSKAWAKKDAGRRFFLFLSFTENSFVIQGDLSSSTANSDQSTSSSRGLTFLCRMRANDDSAPYVPMIVSVALHRDTSGSEKTFLICIARRPPVNELKDKPALLGFDQFSSRINLQYDIESLDSSHMKCETLDMNYAGKNFRDYVHISDIPLIDRHFQEVIEKTESKSSIYRFRLHDDIYAFVNTQSKLFSSTNQTDSILSTHTIVRLIDNINDLNGTASTRLMKSIITSNRDLQKNKPSPPPPQPQQQMSTNRALPTPSPTATPPIGTQFALTMLGMHKNASNSLQQHVSSTLGTLIQVQNSLSSPNDKSQQQQQQQMNPPLSPPRTNLQKSLLLDNVSSTDTVEFGSKRTSFSPSLNSIHSQHGTMPSPMNPFDLLFTPISPSNDLATFLPTSSPSTNKTSNSPLSLVDPTALLFSNHDIYTTTSSPQPAPQTPTLPLSNQSRSSTRLRQLLTTKSPSASPSPHYLQDTRPHSNTFDDFIQAAESPTTTHVSPLSNDLPSPNRRRRNHSQTNGGNSADLLLKQILGRHTPLTTTTNTNENLTLENQLSWSSPNSALGIKTESNMSDENAATTPGSTTKLR