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SCNpilot_expt_300_bf_scaffold_2159_9

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(3056..3679)

Top 3 Functional Annotations

Value Algorithm Source
Nicotinic acetylcholine receptor subunit type D n=1 Tax=Aplysia californica RepID=M4VNF2_APLCA similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 83.0
  • Bit_score: 61
  • Evalue 1.30e-06
Nicotinic acetylcholine receptor subunit type D {ECO:0000313|EMBL:AGI03860.1}; TaxID=6500 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Heterobranchia; Euthyneura; Euopisthobranch similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 83.0
  • Bit_score: 61
  • Evalue 1.80e-06

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Taxonomy

Aplysia californica → Aplysia → Gastropoda → Mollusca → Metazoa

Sequences

DNA sequence
Length: 624
ATGGGATTAACAAGTTTATCCGTTCTCTTAGCTGTTGCTCTACTCAACGTTCATTTATACGGTTCAGCATTGAAACCAGTTCCTTCTCGTCTACGTCAAATTCTCTTTCACCGTCTAGCACCATTGCTTTTTGTTACATTACATCGTGCAGCGAATATTCAAGAACAGAAAAATCCTCGACGCTCGACAGTCAAAGCACTACGACGTGCAACAACAATTTATAATACAGTTTTTCTCAGTGAAAACGACCTACTTCCAAATAAAACTCAACAACAAGAACCATCGGAACACACATTTCAATCGACAACAATCAATAATAATACAAATACAAATTCTGATTCAACTCAAGTGTCAAATATACGATCAACATCCGAATCATTGAGTGAATGTAAACGTCTTTTAACTGATTTAAATCGATTAATTCTACGGCCAACAGACAATTTCGAAGAAGAACAACTGACACGCGATTGGCAAAATGTTGCTTTAGTTCTCGATCGTTGCCTTTTATATTTATATATTATTCTAACAGCTGTTTTAACAATTGTCACACTAGTTCTTGCACCTCTATTAAAAACTGTACCGCAACGACCGGATTATTTTCATTTGAATATAACTCGAGATTAA
PROTEIN sequence
Length: 208
MGLTSLSVLLAVALLNVHLYGSALKPVPSRLRQILFHRLAPLLFVTLHRAANIQEQKNPRRSTVKALRRATTIYNTVFLSENDLLPNKTQQQEPSEHTFQSTTINNNTNTNSDSTQVSNIRSTSESLSECKRLLTDLNRLILRPTDNFEEEQLTRDWQNVALVLDRCLLYLYIILTAVLTIVTLVLAPLLKTVPQRPDYFHLNITRD*