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SCNpilot_expt_300_bf_scaffold_1679_15

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 8384..8671

Top 3 Functional Annotations

Value Algorithm Source
Putative ca2+ release channel ryanodine receptor (Fragment) n=1 Tax=Ixodes ricinus RepID=V5IDW9_IXORI similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 84.0
  • Bit_score: 71
  • Evalue 7.30e-10
Putative ca2+ release channel ryanodine receptor {ECO:0000313|EMBL:JAB73261.1}; Flags: Fragment;; TaxID=34613 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasit similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 84.0
  • Bit_score: 71
  • Evalue 1.00e-09
GD10606 gene product from transcript GD10606-RA; K05327 ryanodine receptor, invertebrate similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 75.0
  • Bit_score: 65
  • Evalue 9.70e-09

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Taxonomy

Ixodes ricinus → Ixodes → Ixodida → Acari → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 288
ATGCCGAGCGGAACGAGTTCATCAGGAGATTCAGGAGCAGCGAAAATTTCCAATGATATGTCGAATACAAATGGCAAACAAAAACGAAAGAAACGACGAATGGACAAAGAGAAATTTACGTCGTTAAGTGTAGCCTGTGTCAAACGTTTGCTACCAGTGGGCATGAATATATTCGGTGGACGTGAACAAGAACTTGTTCAATTGGCTAAACATAAAATGATTGAAGTAGGGAGAGAGAGAGTGAAGATTGATTTGGTGGGTGAAAAAGATTGTTTTTTCGATTTTTAG
PROTEIN sequence
Length: 96
MPSGTSSSGDSGAAKISNDMSNTNGKQKRKKRRMDKEKFTSLSVACVKRLLPVGMNIFGGREQELVQLAKHKMIEVGRERVKIDLVGEKDCFFDF*