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SCNpilot_expt_300_bf_scaffold_2747_1

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 1315..2265

Top 3 Functional Annotations

Value Algorithm Source
Low density lipoprotein receptor n=1 Tax=Philodina roseola RepID=B2L3I8_PHIRO similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 244.0
  • Bit_score: 179
  • Evalue 6.30e-42
Low density lipoprotein receptor {ECO:0000313|EMBL:ACC43940.1}; TaxID=96448 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Philodinida; Philodinidae; Philodina.;" source="Philodina UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 244.0
  • Bit_score: 179
  • Evalue 8.90e-42

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Taxonomy

Philodina roseola → Philodina → Philodinida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 951
ATGCCGGTGCACGATGGTTGTAGAGTAGAGCTGTGTTTATATCCGAAAGGAATGATATGTTCAGATCAAGCAATCGAAACTATAGTTCGTTTATTAAATGCTGATGAAAAACTTAAAAAACCTCAACGTGAATATTTCTTCATTGACTCATCATCATTAATGACAGCAAGAGAAAATTTAACAGTTGGATCTTCTCTATCACATCTATTCGGTACTACTCGAACAGAACTATGCATGCGTGGTGTTCTTATTTACACTCGAAAGAACCTCAGTATGACTTGTCTTTGTCCTCCAAGTTATTACGGAAATCGATGTCAATATCAAAGTCAACGTGTGAGTTTAACTATTCAATTGACTCAAATATGTAACAGTTTATGTACTGGAATCTACGCTATGATTGTAAGTCTGATTGATGAAGATCACATTATTCATGATTATGAACAATTTACATATATATCAACATATGAATGTCAGAAGAAATTCTTCATCTATCTTCTGTATCGAATAAGATCGAAGAATGCAACGAAAATATATTATATTCAAATTGATGCCTATCACAAAATCAATGTCACTTATTATTCGAGTTGGATTTTACCAGTAAATTTCTCATTTCTTCCTGTGAATAGAGTGGCAGCAAATCTCTATATTCCAGCGAATTCTGTTGTTCACATGGCAAATTGCTCAAAATCTTGCGTTCACGGTCAATGTATGACATATATCAATCAACCAAATCAACAATTTTGTCATTGTTTGTCGAATTGGTCGGGAGTGAATTGTACAATTCCATTGTCATGTAATTGTCATCAAGATTCACATTGTTATGAAAAGAAAAACAATCGATCGATTTGTATATGTCCATTGAATAAATACGGACAACGATGTCGATTATTTACAATTTGTCATAATGATACTTGTCAAAATGTAGGTCAATGTATTCACGAAATCAATTGA
PROTEIN sequence
Length: 317
MPVHDGCRVELCLYPKGMICSDQAIETIVRLLNADEKLKKPQREYFFIDSSSLMTARENLTVGSSLSHLFGTTRTELCMRGVLIYTRKNLSMTCLCPPSYYGNRCQYQSQRVSLTIQLTQICNSLCTGIYAMIVSLIDEDHIIHDYEQFTYISTYECQKKFFIYLLYRIRSKNATKIYYIQIDAYHKINVTYYSSWILPVNFSFLPVNRVAANLYIPANSVVHMANCSKSCVHGQCMTYINQPNQQFCHCLSNWSGVNCTIPLSCNCHQDSHCYEKKNNRSICICPLNKYGQRCRLFTICHNDTCQNVGQCIHEIN*