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SCNpilot_expt_300_bf_scaffold_2531_2

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(914..3928)

Top 3 Functional Annotations

Value Algorithm Source
Reverse transcriptase n=2 Tax=Chironomus tentans RepID=V9H092_CHITE similarity UNIREF
DB: UNIREF100
  • Identity: 26.8
  • Coverage: 792.0
  • Bit_score: 251
  • Evalue 4.10e-63
Reverse transcriptase {ECO:0000313|EMBL:AAB04627.1}; TaxID=7153 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Chironom similarity UNIPROT
DB: UniProtKB
  • Identity: 26.8
  • Coverage: 792.0
  • Bit_score: 251
  • Evalue 5.80e-63
similar to RNA-directed DNA polymerase from mobile element jockey (Reverse transcriptase) similarity KEGG
DB: KEGG
  • Identity: 23.4
  • Coverage: 888.0
  • Bit_score: 220
  • Evalue 3.20e-54

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Taxonomy

Chironomus tentans → Chironomus → Diptera → Neoptera → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 3015
ATGCTAAACCCTCTTGCTTCTCCTTTTGCACCTAGCCTCGCTTCAAATGCTTATTTTAATAGAAATGCATGCCCAATTCAAAGCGCTATACTAAGATTAAGAAAGTGTGGGGCACACACAAGAGACATAGAAAGAATAAAACCACTGCTAACCGAATGGTTCACTACAAGCACACTTAACGGAACATTAAAAAAATGGGAAGAGTATAACTCAGGAGAAAGTGAATCAGAAAGAGTACAGAATACACCTATGACTTTCATACTCTATAATGTAGAAGCACTAAACGCGAGACATCTAGAAGTGACTGAACTAGCACACCAGACAGAAGCATCATTTGTAATATGTACGGAAATAGGAGAACTGGGTCATCATCAACAAATAACTAACTACAACATGTTTTACGAAAAAGGAACAAATAAAAACGGAGGAGTTGCAATAGGAGTCGGTAAGCATCTAAAAGCCGCGAAGTTAGAAACGAACATAGAAAATACCTTAGCTGTTGATATCTTCGGACTTAATGAACCACTCAGAGTCATTGGAATATACTGGCCAGAGAAACAGAAAAGAAGCCTAGATGATATCCTTCCGTTTATCACTAAAAACACTCTAATAGCAGGCGACTTTAATGCAGCAGTACAGGAATGGAACAGCCCTTCCACTGATAACAGAGGCAAGTTAGTAAAAAATTGGAGTGAGCATAACTATCTAAAATATATTGGTGGAACCTTCAACTCCTCAAAAAGATCACTAAGGAACATCGATTACACGTTAGCAAACTTCGAGGGGATTAAGGGAGAAACCTTAAATTTCGGAACAAGCGATCACTGGCCTCTGGTATACAAATCGGAACTCATATGTCTTAGTAACATAAACAAATTCTCGATCTCAGACTGGAAAACATACGAACTCTTCTTGTGCCTTATGCAAGAGTTCTGGATGACTCAACTTGAATACAGCGGAGCCTTAGAGTGGTACAAAACTTACATAAGATTTTTAACAGCCCTTAAGAATAGACTTACGAGATGGGAAGAAAAAGATATGTGGAGGCCGGCTCTTCCGCAAGAAATTCTAAGGAAGCTTAAAGAGCTAAGGAAAATCAAGAACAGATTTCAACACCAACACTTAGAAGAAGATAGAATAGAAATCAGACAACGAACTAGAAGCATAAATTCAGAAATATGGGAATATAGATCCAACAGGTGGAACCAATTCCTTGCGACGATACAAAAAAACCATATGAAATCAAGTACTCAGTTCTGGAGAAACGTATCTAGAATATATAAACCTGCCACTACCCCCTTCAATAAACTAAAAGACGGAAACAGATTCTTAATTTCACAAAAGGAAATAACCGATGAATTAGCAGGTCACTATAAAAAGCTATACTCACCGCCTATCATGGATCTCAATAGCATACATGATCAAAGCATCAATAGAGAGTACAACCAAATTGCGCAGGAGCTTAGTCTGTGTAATATTAAAATAAGAACTACAAATACTACTGAAGTTAAAAAATATATTAGAGAACTAAAGCCAAAGAAATCCGCAGGTATTGACACTGTATCAAACTTTATGATAAAAAAACTCCCCCCGGCATATATTGAATGCCTTACTAAGTGTTTTAACATCTGGCTAGACAATCACTCATACCCAGAAGTCTGGAAAGTAGCAAAAATAATCACTTTGAACAAACTAAAAGCAGGAATACCAAATTGTGAGCAAACGAGACCTATCTCATTACTAGCAACCCACTCCAAGATATACGAAAAAATAATGTTGGATAGAATTAAGAACTGGTCAGAATCAAATAACATCATACCTAAAGAACAGTCAGGTTTTAGGAAAGGATGCCTCCTCCAAACTAGAGTATTGTCAATTCTGCAAGAAGTAAAGAACAATCTAGCAGGAAATGTACCCACTCTAGGTATATATGTCGATTATAAAAAGGCCTACGATCTCGTTTGGCACGAAGGACTAATAGTAAAATTGTACAGAATGCAAGTGCCCATGCAATTACTTAAAATCCTACTAGAATGGCTGAAGGGCAGGAAAGCATATATCAGTTTCGGATCAAATAAGTCAGAGCTCTTTAGCTTACCGGTCGGCCTACCACAAGGAAGCTCTCTAAGCCCATATATCTTCATAATGTACCACGCAGACATTACCAACAGTATAAGAGCTTTCTCTACTCACATTTTTGCTGACGACCTATGTACACTAATTACACCACCGATACACACGGAAGTCAAAGAGATGGTTAAATTCATAAACTCAGTAGGATCAGAGATATGTCAAAACCTCTACAATTATTCTATAAAATGGAAACAACCTATAAATATAGATAAGACAGTAGTACAAATTTTTCACTCTCAAGTCAAAACTCCGCAGGTCGAAATTAAAATGAACAACTGTAAATTGGATACGGTTAGATCCTTTAAATACCTAGGCGTTACGTGGTCAGATAAATTGTCCCTTAAACCCACTGTCCTGTCGTGCATGGAGAAAGTGCAAAAATCGTATGTAAAATTAAAGTGGTTACAGAAAAATAAGGAAATATCCACAAAAGTGCTGAGAACGTGCTTTTTCGCGTACTCCTTCCCCTTTTTTACGTGGTTATTTCCACTTTTTCCATTACTGCCAAACTCGCTACAAAACCAAGTCAGAAGGAAATACAGAGTAGGAATACGCCTGATTCATAGGTGCCCTTTCACAAACTCAGAGGAGTTGCTCAGAGTCACGAAAGAAGTGCCACTTGAACAGTACATATGTAGATACCTGAAGAAACGTCTTGCAAATGCTCATAAAACAGATCTAGGGTCATCAATGTTCTACGAAGATGTTTTTATGTGGGAACATATAACTCAAAATGCGGACATAACCAAAAGAAGAAGTCAGAGCCTAAAGATAGGCCATTTTTACAGGAATAAAAGAGTCAAAAGTATGTTAGAGAAACACCAATCCGACATCCTAACGTGGATGGAGTTTGAAGACCAACATGATACCACACCTAATTAG
PROTEIN sequence
Length: 1005
MLNPLASPFAPSLASNAYFNRNACPIQSAILRLRKCGAHTRDIERIKPLLTEWFTTSTLNGTLKKWEEYNSGESESERVQNTPMTFILYNVEALNARHLEVTELAHQTEASFVICTEIGELGHHQQITNYNMFYEKGTNKNGGVAIGVGKHLKAAKLETNIENTLAVDIFGLNEPLRVIGIYWPEKQKRSLDDILPFITKNTLIAGDFNAAVQEWNSPSTDNRGKLVKNWSEHNYLKYIGGTFNSSKRSLRNIDYTLANFEGIKGETLNFGTSDHWPLVYKSELICLSNINKFSISDWKTYELFLCLMQEFWMTQLEYSGALEWYKTYIRFLTALKNRLTRWEEKDMWRPALPQEILRKLKELRKIKNRFQHQHLEEDRIEIRQRTRSINSEIWEYRSNRWNQFLATIQKNHMKSSTQFWRNVSRIYKPATTPFNKLKDGNRFLISQKEITDELAGHYKKLYSPPIMDLNSIHDQSINREYNQIAQELSLCNIKIRTTNTTEVKKYIRELKPKKSAGIDTVSNFMIKKLPPAYIECLTKCFNIWLDNHSYPEVWKVAKIITLNKLKAGIPNCEQTRPISLLATHSKIYEKIMLDRIKNWSESNNIIPKEQSGFRKGCLLQTRVLSILQEVKNNLAGNVPTLGIYVDYKKAYDLVWHEGLIVKLYRMQVPMQLLKILLEWLKGRKAYISFGSNKSELFSLPVGLPQGSSLSPYIFIMYHADITNSIRAFSTHIFADDLCTLITPPIHTEVKEMVKFINSVGSEICQNLYNYSIKWKQPINIDKTVVQIFHSQVKTPQVEIKMNNCKLDTVRSFKYLGVTWSDKLSLKPTVLSCMEKVQKSYVKLKWLQKNKEISTKVLRTCFFAYSFPFFTWLFPLFPLLPNSLQNQVRRKYRVGIRLIHRCPFTNSEELLRVTKEVPLEQYICRYLKKRLANAHKTDLGSSMFYEDVFMWEHITQNADITKRRSQSLKIGHFYRNKRVKSMLEKHQSDILTWMEFEDQHDTTPN*