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SCNpilot_expt_300_bf_scaffold_2365_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(4096..4509)

Top 3 Functional Annotations

Value Algorithm Source
Patched (Fragment) n=1 Tax=Ciona intestinalis RepID=Q66NS3_CIOIN similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 135.0
  • Bit_score: 156
  • Evalue 1.90e-35
Patched {ECO:0000313|EMBL:AAU04386.1}; Flags: Fragment;; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" source="Ciona intestinal similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 135.0
  • Bit_score: 156
  • Evalue 2.70e-35
Niemann-Pick C1 protein precursor, putative; K12385 Niemann-Pick C1 protein similarity KEGG
DB: KEGG
  • Identity: 59.0
  • Coverage: 134.0
  • Bit_score: 155
  • Evalue 1.30e-35

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Taxonomy

Ciona intestinalis → Ciona → Enterogona → Ascidiacea → Chordata → Metazoa

Sequences

DNA sequence
Length: 414
ATGATTGGAATGATGTATCTCTGGAATATCGAACTCAATGCCGTTTCACTTGTCAATTTAGTTATGTCAGTTGGCATATCATTGGAATTTTGCGCACATATAAGTCGTGATTTCGTCCTATCAACTCAACGTTCACGTTTGAAACGTGCCGAACACGCACTTGCTGATATGGGCAGTTCGGTAAATTCATTCATTTTAACTCTAAAATATTCGAATTTTGTCGATTTTATTTTCTATTCTCAGGTATTCAGTGGCATCACTTTAACCAAAATCGGAGGCATCGTCGTGCTTGGCTTTTCACATTCTCAATTATTTCATGTATTTTATTTTCGAATGTTTATGTGCATTGTTTCATTTGGTGCTTTACATGGTCTCATTTTTCTTCCCGTTATGTTAAGTTATATAGGTAAATAA
PROTEIN sequence
Length: 138
MIGMMYLWNIELNAVSLVNLVMSVGISLEFCAHISRDFVLSTQRSRLKRAEHALADMGSSVNSFILTLKYSNFVDFIFYSQVFSGITLTKIGGIVVLGFSHSQLFHVFYFRMFMCIVSFGALHGLIFLPVMLSYIGK*