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SCNpilot_expt_300_bf_scaffold_1966_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 1466..1882

Top 3 Functional Annotations

Value Algorithm Source
Transcription factor protein (Fragment) n=1 Tax=Ciona intestinalis RepID=Q1RL84_CIOIN similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 124.0
  • Bit_score: 113
  • Evalue 1.40e-22
cbf-1, Ci-CBF-1; transcription factor CBF/NF-Y/archaeal histone -1 similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 124.0
  • Bit_score: 113
  • Evalue 4.50e-23
Transcription factor protein {ECO:0000313|EMBL:FAA00181.1}; Flags: Fragment;; TaxID=7719 species="Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 124.0
  • Bit_score: 113
  • Evalue 2.00e-22

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Taxonomy

Ciona intestinalis → Ciona → Enterogona → Ascidiacea → Chordata → Metazoa

Sequences

DNA sequence
Length: 417
ATGATCGATTCTCCGTCGAATGAAGAAGATGATAAATGTGTGCTTCGTGCAGCTGTATATAAAATGATAAAAGATTGTACACAACAAATCCGTGTATCGAGTGAAGCAAAAGAATTTTTCGTTCAATGTTGTAATGAATTTATCCATACGTTAGCGCTGCAAGCGAATAGTGTTTGTGAACAACAAACAAAGAAACTCGTTCATCCCGATCATATTGTCATGGCGTTGGAAAATCTCGGTTTTGCTTCGTATAAAACCGATTGTTTGAGTGCGATGGAAACGGCACAACAAGAATTGCAACAGAAACGACGTAAACTTCATGGAAAAATGACGTCGATCTATACCGATGAGGAACTTCGACAACAGCAGGAATTGTTGTTTCAACAAGTAGAAATTTGCTTTGTTTTGTTCGAATGA
PROTEIN sequence
Length: 139
MIDSPSNEEDDKCVLRAAVYKMIKDCTQQIRVSSEAKEFFVQCCNEFIHTLALQANSVCEQQTKKLVHPDHIVMALENLGFASYKTDCLSAMETAQQELQQKRRKLHGKMTSIYTDEELRQQQELLFQQVEICFVLFE*