ggKbase home page

SCNpilot_expt_300_bf_scaffold_2404_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(5278..6648)

Top 3 Functional Annotations

Value Algorithm Source
Low density lipoprotein n=1 Tax=Adineta vaga RepID=G3KGV9_ADIVA similarity UNIREF
DB: UNIREF100
  • Identity: 29.3
  • Coverage: 423.0
  • Bit_score: 155
  • Evalue 1.10e-34
Low density lipoprotein {ECO:0000313|EMBL:AEN94416.1}; TaxID=104782 species="Eukaryota; Metazoa; Lophotrochozoa; Rotifera; Bdelloidea; Adinetida; Adinetidae; Adineta.;" source="Adineta vaga (Rotifer) similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 423.0
  • Bit_score: 155
  • Evalue 1.50e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Adineta vaga → Adineta → Adinetida → Bdelloidea → Rotifera → Metazoa

Sequences

DNA sequence
Length: 1371
ATGTTTATTCCATCAATTCCAATTTTATTTGGTGATATTTATATCACCTATATTAAAGATCAATCAAGAAGCATCAGTAATAATACAACAATCGATTTTTATTTATGTTCCAATAATTCTCAATATGAAAATTATTTTATTAACAATTTGAAAATAAGAATGAGAAATACGACATGCTATGAAAAAATCCAATGGACATTCAACCGACAAGCATTTACAATCAGTCGTTTATTTAAACATATATATGGACCATTACATAGTTATAATCGATTTTGGAACTATTCATCGAATATCTGTAAGCAATCGCATATGTATCAATGTTTTCAATCTGACAAATGTATATCAATCTATCGTGTATTAGATGATACTCCAGATTGTCCGTATTCCGATGATGAAAATGTCAATTTACTCGAAGATATTGATATTCAAAATCAATATAAATATACTCATTTTCAATGTCCAAATTCAAACAAATTTATTCCACATTGGAAATTAGAAAATGGAAATTGTGATTGTGATACAAGTGCTAAAACTCAAGACGATCAAGGTGATTGTGAAATTTACAATCAAAATTATTTTTGGTCGTTTGCTAATGCATACCGTGGTATATTCTGTAATGGAGTGGTCGATTTTCCACCAATTCTAATCAATGGAAAAAATATAACCGATGAAACAGATTGCAAACCTAAAGTAACTAATAAAAATGTTAAAACATATTTACAATCATCATCAGATTTAAAGTATTCATTGATAAAAACATTGAAACATTGTCATTTCGGTGTTAGTTTACATGTTTGGTTAGATAGTATGAAACAATTATCAAAAAAAACATGTTTATGTCCATCAAATTATTATGGTGATCAATGTCAATATCAAAATCAACGTGTTATACTTCGTATTGCCTTCGATACATCGTATAATCGTTTCAATACAGCTTTTCTTGTTAGTATTTCATTGATTGACAATAGTAATGAACGTATGATTCATTCTCATGAACAATTCACTGAAACGAGAACAGATTATTGTCGATTTGAAAATTCTCTAAATTTATTCTATTCAACACGACCAAAAGATGAACGAAAATCTTATTTTATTCATGTGGATATCTACGAAAGAATATCATTCAAATATCGAGCAAGTTATTTATTTCCAATTGATTTTCCATTTTTACCTGTTAATCTCGTTTCAAAAGTAATATTGATTCCAAAAAATACGATTAAAATCAAATATTGTTCTAATCGTCAATGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATCAATGTACGTGTTCATCGGATTCGTTATGTATTGGTCTATCTGCTCAAAATCGATCGATCTGTGTTTGTCCAATGA
PROTEIN sequence
Length: 457
MFIPSIPILFGDIYITYIKDQSRSISNNTTIDFYLCSNNSQYENYFINNLKIRMRNTTCYEKIQWTFNRQAFTISRLFKHIYGPLHSYNRFWNYSSNICKQSHMYQCFQSDKCISIYRVLDDTPDCPYSDDENVNLLEDIDIQNQYKYTHFQCPNSNKFIPHWKLENGNCDCDTSAKTQDDQGDCEIYNQNYFWSFANAYRGIFCNGVVDFPPILINGKNITDETDCKPKVTNKNVKTYLQSSSDLKYSLIKTLKHCHFGVSLHVWLDSMKQLSKKTCLCPSNYYGDQCQYQNQRVILRIAFDTSYNRFNTAFLVSISLIDNSNERMIHSHEQFTETRTDYCRFENSLNLFYSTRPKDERKSYFIHVDIYERISFKYRASYLFPIDFPFLPVNLVSKVILIPKNTIKIKYCSNRQCXXXXXXXXXXXXXXNINVRVHRIRYVLVYLLKIDRSVFVQ*