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SCNpilot_expt_300_bf_scaffold_2456_10

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 3435..3845

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: protein fantom isoform X2 n=1 Tax=Jaculus jaculus RepID=UPI0003333C37 similarity UNIREF
DB: UNIREF100
  • Identity: 47.1
  • Coverage: 85.0
  • Bit_score: 66
  • Evalue 2.60e-08
RPGRIP1L; RPGRIP1-like similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 85.0
  • Bit_score: 66
  • Evalue 1.10e-08
Protein fantom; Nephrocystin-8; RPGR-interacting protein 1-like protein; Short=RPGRIP1-like protein;; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eu similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 85.0
  • Bit_score: 64
  • Evalue 1.00e-07

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Taxonomy

Homo sapiens → Homo → Primates → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 411
TTGGCAACGAAATTAACGAAAGTTGTTGAAGATAAAAAGAAAAGTGAAGCTGTACCGTTAGGTGTGAGAGCAGGTGCTCGTGCAACTGAAACTGAAGAATTACTTGCTGAATCTCGAAATAAAGTTTCAGAATTAGCCGAACAAAATCGGCTATTGAAACAACGTCTTATCGTTGCACAACAACAACTTCAAGCAGCACAACAACTAAAAAAATCAAGCACTATGTACGAGAGTGTCTCATCAAGAATTGATACAGTAAATTTATCAATCGAATTCGATTTCATACAAATTCAAATTTTCAGGGCCAACCCAAACGTATACCATCTCCTTTACATCATAATATTCGTGTTATTGGTCCACGTGGTTCTACTAGATTATCGGGAACGACTCCTCGAGTCGATGGTGGATTGA
PROTEIN sequence
Length: 137
LATKLTKVVEDKKKSEAVPLGVRAGARATETEELLAESRNKVSELAEQNRLLKQRLIVAQQQLQAAQQLKKSSTMYESVSSRIDTVNLSIEFDFIQIQIFRANPNVYHLLYIIIFVLLVHVVLLDYRERLLESMVD*