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SCNpilot_expt_300_bf_scaffold_2498_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 1228..2289

Top 3 Functional Annotations

Value Algorithm Source
Protein polybromo-1 (Fragment) n=1 Tax=Mus musculus RepID=D3YYF2_MOUSE similarity UNIREF
DB: UNIREF100
  • Identity: 32.1
  • Coverage: 399.0
  • Bit_score: 188
  • Evalue 1.20e-44
Protein polybromo-1 {ECO:0000313|Ensembl:ENSMUSP00000123546}; Flags: Fragment;; TaxID=10090 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontogli similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 399.0
  • Bit_score: 188
  • Evalue 1.60e-44
PBRM1; polybromo 1 similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 353.0
  • Bit_score: 174
  • Evalue 7.10e-41

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Taxonomy

Mus musculus → Mus → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 1062
TTGTACATTCAAATTCGTGATGATCTTTGTCATCACGGGAATCTACTTCGATCGAATGCGCTTCTCTTCACTGAAGAACTCATTCGTGAACACAAACCAACAGTAAATCAATCGAAATCGAACAGTACAACAACACAATCGATACAAAATGAGAAATTTTCTATCGGCGATTTTGTTTATATCGAACCGATTGATGACAAACACGAGCCGAATATCTTCTGTATTGAGTCATTTGAAAAGAAATTCAATGAAGAATACTTCGTTGGCTATCAATTCTATCGACCAAATCAAACTTATCATTTGCCAACAAAGAAATTCCTTCGACAAGAAGTTTTTCTCACGCAAAATCTCGAACATCTACCTGTCAAACAAATTCAACGTCTTTGCCATGTTTTACATTACAAAGATTATTATAAATATCAGCCGATGATTGACAATGAAAGTCAAGTGAAAATCGATGATTTAGATAAAGATGTTTATGTTTGTGAGTCTCGTTATAATACGAAAACCAAAATGGACAAGAAAATCAAATGGTGGAATCTACCGGACAGTCAACGAGTGAAATTAGTGCCGAGAACGATTCCACTTGAGCCGATACGTGAAATTCTAGCAAATGAAAATGAAAATCTTATTCATGATTCTGATGTTACAAATGTCGATGTTATCGAAAAAAGCAAAGAAACAATTCCGTATGATTCAGTTATCAATGAGAAATTAAATGAAAATAATCAAGACAAGAAACAATTCTTCGAACAGATCGTTTTGTCAACGAATTGTTTCTATAAAATAGGAGATTATGTTTATGTTAATGATGAAAATAACAAACAATCGATTCTACATATTGAACAAATCTGGAAAGATCATAGTTCGTATCGAATCTGTGGATCGATTTTTATTCGATTTAATTACATACTCAAACTAGAACAATTAATAAACACAACTCGAGCATCTTACGAACGTGAACTTTTCAAATGTGATGAACTTCGAAAAACCGTTTCGATTGACGATATTCAAGGCAAATGTTCGGTTCTATCCGTCGCACATTATACCACATGTAAATGA
PROTEIN sequence
Length: 354
LYIQIRDDLCHHGNLLRSNALLFTEELIREHKPTVNQSKSNSTTTQSIQNEKFSIGDFVYIEPIDDKHEPNIFCIESFEKKFNEEYFVGYQFYRPNQTYHLPTKKFLRQEVFLTQNLEHLPVKQIQRLCHVLHYKDYYKYQPMIDNESQVKIDDLDKDVYVCESRYNTKTKMDKKIKWWNLPDSQRVKLVPRTIPLEPIREILANENENLIHDSDVTNVDVIEKSKETIPYDSVINEKLNENNQDKKQFFEQIVLSTNCFYKIGDYVYVNDENNKQSILHIEQIWKDHSSYRICGSIFIRFNYILKLEQLINTTRASYERELFKCDELRKTVSIDDIQGKCSVLSVAHYTTCK*