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SCNpilot_expt_300_bf_scaffold_3654_8

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(5978..6370)

Top 3 Functional Annotations

Value Algorithm Source
Predicted protein n=1 Tax=Hordeum vulgare var. distichum RepID=F2E6U6_HORVD similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 128.0
  • Bit_score: 200
  • Evalue 1.10e-48
Predicted protein {ECO:0000313|EMBL:BAK03068.1}; TaxID=112509 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP similarity UNIPROT
DB: UniProtKB
  • Identity: 77.3
  • Coverage: 128.0
  • Bit_score: 200
  • Evalue 1.50e-48
RNA binding protein similarity KEGG
DB: KEGG
  • Identity: 26.7
  • Coverage: 120.0
  • Bit_score: 63
  • Evalue 5.90e-08

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Taxonomy

Hordeum vulgare → Hordeum → Poales → commelinids → Streptophyta → Viridiplantae

Sequences

DNA sequence
Length: 393
ATGAATACATCTGCAAGTGTTTCAACATCCCCATCATCACCACCCACAATAACAAATCCTATTTCAACATTAAATCAAGATAAAATCGAGCCTGATGCTGATGCTATTAAAATGTTTTGTGGTCAAATACCACGGAATATGCAAGAATCCGAATTACGCGAAATGTTCGAACAGTTTGGTCCTGTCTTTCAATTGAATGTTCTACGTGACAAACAAACGGGTGAATCGAAAGGTTGTTGTTTTGTGACTTTTTATACAAGAAAAGCAGCATTAGATGCTCAAAATGCCCTTCATAATCTACGAACATTAAATGGTAGTCATCATCCGATACAAATGAAACCAGCTGATACAGAAAATCGAAATGGTATTAAGAGAAAAATTAAAATTTTTTAA
PROTEIN sequence
Length: 131
MNTSASVSTSPSSPPTITNPISTLNQDKIEPDADAIKMFCGQIPRNMQESELREMFEQFGPVFQLNVLRDKQTGESKGCCFVTFYTRKAALDAQNALHNLRTLNGSHHPIQMKPADTENRNGIKRKIKIF*