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SCNpilot_expt_300_bf_scaffold_5913_4

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2170..3171

Top 3 Functional Annotations

Value Algorithm Source
LOC100158448 protein n=1 Tax=Xenopus laevis RepID=B2GTX7_XENLA similarity UNIREF
DB: UNIREF100
  • Identity: 32.2
  • Coverage: 332.0
  • Bit_score: 145
  • Evalue 8.20e-32
Oncorhynchus mykiss genomic scaffold, scaffold_912 {ECO:0000313|EMBL:CDQ76904.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Tel similarity UNIPROT
DB: UniProtKB
  • Identity: 30.7
  • Coverage: 336.0
  • Bit_score: 146
  • Evalue 5.10e-32
vps33a; vacuolar protein sorting 33 homolog A similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 332.0
  • Bit_score: 145
  • Evalue 2.60e-32

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Taxonomy

Oncorhynchus mykiss → Oncorhynchus → Salmoniformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 1002
ATGTTAGCTGTTGGTAAAGTTCTTCAAGAAGGTGCACGTGCACAACAAGCATTACGAGAAGAATTCGATAAGAAATTCAATAAACCAACGGAAAATATTCAAGGACAAAAACTATCTGATCTACGTGGATTTGTTGCTGATATGACGAAACAAAATGCTAAAACACAAACATTATCAACACACATTGAATTAGCTTATAATATCAAACAAGAATCGAAATCAACCTATGATTTATATCTATCCAATCAATTATCTCTTCTATTTACATCGGTTTTACAGGATGCTCTACGACAAATCGATGAACGTATCGCATGGAAAGATAATATCTTTTGTATTCTTCGATATTTAGCTGTATTAACACATGCTCTATCGACACAATTGAAACGTAAAGAATATGATTTAATTAAGAAAGATATTGTACAAACATTTGGTTTGCAATATTTGGTTTTAATTCATGCACTTGAACAAGTCGGTATTCTACATGTACCTGACATAGCCAAAAGTTCGACGACAACGAAAACAAATGAATCATTTTTCGACCGTTTAAAACGAGAATTTAATCTTTTACAAGATGGGCAAATTGATCTTTATGATCCTCAAGATATTTTCTATATCTATTATCAATATGCACCATTAAGTATACGTTTAATCGAAAAGATTGTCTTTTCATCAGCATCAGCCGTTCAAGATTCCATGAATATCCTGCCCGGTACGACATTTATCGATATGCAACAAGTACCCATGGATTTAAAACGTGCTCGTCAAGGTTCATCGTCATCAATTCATTCGTTAAATCGAACAAATAAACAACAAGTTCAACAACAAAATACGGAATCGAAAGTAACATTAGTTGTTTTCATTGGTGGAATAACCTACGGTGAAATAGCTGCATTGAGATATCTTGCCGATCAAAATCATGATTTTATTATTGCAACAACAAATTTTATCAATGGAACAAATCTAATGAAATCTTTACTCGATGTACCGATTTTACCTTCGTGA
PROTEIN sequence
Length: 334
MLAVGKVLQEGARAQQALREEFDKKFNKPTENIQGQKLSDLRGFVADMTKQNAKTQTLSTHIELAYNIKQESKSTYDLYLSNQLSLLFTSVLQDALRQIDERIAWKDNIFCILRYLAVLTHALSTQLKRKEYDLIKKDIVQTFGLQYLVLIHALEQVGILHVPDIAKSSTTTKTNESFFDRLKREFNLLQDGQIDLYDPQDIFYIYYQYAPLSIRLIEKIVFSSASAVQDSMNILPGTTFIDMQQVPMDLKRARQGSSSSIHSLNRTNKQQVQQQNTESKVTLVVFIGGITYGEIAALRYLADQNHDFIIATTNFINGTNLMKSLLDVPILPS*