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SCNpilot_expt_300_bf_scaffold_5959_5

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(5480..6016)

Top 3 Functional Annotations

Value Algorithm Source
Gamma aminobutyric acid receptor subunit n=1 Tax=Echinococcus multilocularis RepID=U6I3R2_ECHMU similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 135.0
  • Bit_score: 86
  • Evalue 4.10e-14
Gamma aminobutyric acid receptor subunit {ECO:0000313|EMBL:CDS42766.1}; TaxID=6211 species="Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 135.0
  • Bit_score: 86
  • Evalue 5.80e-14
nicotinic acetylcholine receptor alpha 9b subunit similarity KEGG
DB: KEGG
  • Identity: 29.5
  • Coverage: 173.0
  • Bit_score: 81
  • Evalue 3.20e-13

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Taxonomy

Echinococcus multilocularis → Echinococcus → Cyclophyllidea → Eucestoda → Platyhelminthes → Metazoa

Sequences

DNA sequence
Length: 537
TTAAAAGAACAGATTCGTTATAGTGCCAAACGATCTCGTTGCGATCAACGATATTATATTTGTGAACATCGAGATATCAAAGGTTTATTTTGGGAGAAACTTGAATTACAACATTTTCCATCCGATGTACAAGAATTATCGATATCAATCGGTTCGTGTTATTACAATGATAAAGTTATTTTAACTCCTGATTCGTATAATTTAAGTGGAATCAATCGAGAAATATTCATTGATCAACAAGAATGGTCATTGTATGAACATGTTAATACACAACAGAGATTTCTTAAAGAATTTATGTTGAAACATCATGATGAAGAAGAATTGCAAATGCGGACAAGAGAAGGACGTAAACGTTCGTTTGTTACTGTTTCTTGTTATGCAGGTTCATTTTCTGTTGTTTTCTTTTCTTTTCAAAGATATCAAACGATTTTGTTTTGTAGCTCGACGTTCAGGATACTTCTATTGGAATGGTTATTGTCTTGTGTTTTTAATCACTATCTGTGCCTTTTGTACCTTTTCAATTCCACCGAAGTTTGA
PROTEIN sequence
Length: 179
LKEQIRYSAKRSRCDQRYYICEHRDIKGLFWEKLELQHFPSDVQELSISIGSCYYNDKVILTPDSYNLSGINREIFIDQQEWSLYEHVNTQQRFLKEFMLKHHDEEELQMRTREGRKRSFVTVSCYAGSFSVVFFSFQRYQTILFCSSTFRILLLEWLLSCVFNHYLCLLYLFNSTEV*