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SCNpilot_expt_300_bf_scaffold_6152_6

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 2850..3077

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein ; K12812 ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 64.0
  • Bit_score: 72
  • Evalue 8.20e-11
Spliceosome RNA helicase BAT1 n=1 Tax=Lepeophtheirus salmonis RepID=D3PJF7_LEPSM similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 66.0
  • Bit_score: 75
  • Evalue 2.40e-11
Spliceosome RNA helicase BAT1 {ECO:0000313|EMBL:ADD38693.1}; TaxID=72036 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Maxillopoda; Copepoda; Siphonostomatoida; Caligidae; Lepeophthei similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 66.0
  • Bit_score: 75
  • Evalue 3.30e-11

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Taxonomy

Lepeophtheirus salmonis → Lepeophtheirus → Siphonostomatoida → Copepoda → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 228
ATGCATGTTGTAACCAAGAAGTTACATTATTATGTCAAAGTACATAAACGCGACAAACGAAAGAAATTATGCGATCTACTTGATAGATTAGAATTTCGTCAAGTGATTATTTTCGTTAAATCAGAAACATGCTGCACTTCTTTAAGATACTTTTTGATGACGCAAAGTTTTCCTGCTGTTGAACTTCATCGCAAAATGGGAACGCACGATCGGTTAGATTCCATATAA
PROTEIN sequence
Length: 76
MHVVTKKLHYYVKVHKRDKRKKLCDLLDRLEFRQVIIFVKSETCCTSLRYFLMTQSFPAVELHRKMGTHDRLDSI*