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SCNpilot_expt_300_bf_scaffold_6925_6

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: 4982..5197

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein (Fragment) n=1 Tax=Daphnia pulex RepID=E9FSP0_DAPPU similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 74.0
  • Bit_score: 97
  • Evalue 4.20e-18
Putative uncharacterized protein {ECO:0000313|EMBL:EFX89234.1}; Flags: Fragment;; TaxID=6669 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomop similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 74.0
  • Bit_score: 97
  • Evalue 5.80e-18
cys-loop ligand-gated ion channel subunit; K05175 gamma-aminobutyric acid receptor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 71.0
  • Bit_score: 95
  • Evalue 6.60e-18

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Taxonomy

Daphnia pulex → Daphnia → Diplostraca → Phyllopoda → Arthropoda → Metazoa

Sequences

DNA sequence
Length: 216
ATGAATTGTTATTTTCGTCAACGATGGCGTGATGAACGTTTGCAATTTGCTGAAGAAGTTGGCGTACTTTCATTGTCAACGAGTATGCTCGAACGTTTATGGCGGCCGGACACAGTTTTCTATAATTCGAAATATTCGTATTTACATACGATACCGACGAGTAATCGATTGTGGAGATTGTTTCCCGATGGATCGATTTGGTATTCATCTCGGTAG
PROTEIN sequence
Length: 72
MNCYFRQRWRDERLQFAEEVGVLSLSTSMLERLWRPDTVFYNSKYSYLHTIPTSNRLWRLFPDGSIWYSSR*