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SCNpilot_expt_300_bf_scaffold_20654_7

Organism: SCNPILOT_EXPT_300_BF_Rotifera_33_5

partial RP 8 / 55 MC: 3 BSCG 4 / 51 MC: 1 ASCG 5 / 38 MC: 3
Location: comp(3608..4693)

Top 3 Functional Annotations

Value Algorithm Source
xrn1; 5'-3' exoribonuclease; K12618 5'-3' exoribonuclease 1 [EC:3.1.13.-] similarity KEGG
DB: KEGG
  • Identity: 35.6
  • Coverage: 376.0
  • Bit_score: 209
  • Evalue 2.00e-51
Very similar to mouse Dhm1 and Dhm2 n=1 Tax=Guillardia theta RepID=Q98RU7_GUITH similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 422.0
  • Bit_score: 228
  • Evalue 1.40e-56
Very similar to mouse Dhm1 and Dhm2 {ECO:0000313|EMBL:AAK39852.1}; TaxID=55529 species="Eukaryota; Cryptophyta; Pyrenomonadales; Geminigeraceae; Guillardia.;" source="Guillardia theta (Cryptomonas phi similarity UNIPROT
DB: UniProtKB
  • Identity: 33.6
  • Coverage: 422.0
  • Bit_score: 228
  • Evalue 1.90e-56

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Taxonomy

Guillardia theta → Guillardia → Pyrenomonadales → Cryptophyta → Eukaryota

Sequences

DNA sequence
Length: 1086
ATGGGCATTCCTAATTTCAATCGTTGGCTATTGGAAAAATATCGAAATATCAAACAGATTCATACTGAAATTCAATGTGATAATCTCTATTTGGATACAAATGGAATTATTCATAAATATGCACAAAAAAATCTCGATGAACAATTAATTATTCAGCAAGTTCTCGATTTTCTCGATCGACTTATTCGATCAGTTCGTCCACGTGAATTGATTTATATAGCGTTGGACGGTGTTGTACCTCGAATACGAATGACATATCAACGAACAAATCGATTTATTAAATCAAAAAATCTCTCTGAAAATAAATTCGACGAATGTCATATCAAACCAGGCACAAAATTCATGATGAAATTCTACAAATGTCTTCATTATTTTATCTCTCATCGAATGGATACAGATCAACTTTGGCGTTCATTGAAAATTATTCTTTCGAATGCTAATGTGCCCGGCGAAGGCGAACAGAAAATTGTTAACTTCATTCGTAAACAATCGAATTTACTTACTCATGTTATCTATGGTTCAGATAGTGATTTAATTCTTCTTGGTTTATCTACACATCAATCAAATTTACTAATTAGCCACGAATTCAATGATTCAGAAAATCGATTCGTTTGTATTAGTTTATCGAAATTACGTACTGAATTAATGAATGAATCAAAACAAATCAGTTCATTACGGAATGTCGAACGTTTTATCGACGATTGGATTTTTCTTTGTCTTCTATTTGGTAATGATTATCTACCGAAATCATTTTCCATGGATTTTTTTGGATATTCGATTACAATGGAGATGTTATTGAATGTTTACAGAAGGGTTCTTCCGAAATCCAATGACTATCTAACAGAAAATGGAAGTATCAATCAAAATCGATTGATTCTATTCTTCAAAGCTCTTTATGAATTGGATAAAGACGGTAAACTTCGACGAACGATCTATTACGAAAATAAATTTCATATTCAAAACAATCAATTGGAAAACTTTGTTAGCAAACTCGTCGAAGATTATGTTCGAGGTTTATCTTGGACTTTGGAATATTATTTCGGAACGGTTCCGTCATGGGATTGGTTAGTTATAGATTTCAATTAA
PROTEIN sequence
Length: 362
MGIPNFNRWLLEKYRNIKQIHTEIQCDNLYLDTNGIIHKYAQKNLDEQLIIQQVLDFLDRLIRSVRPRELIYIALDGVVPRIRMTYQRTNRFIKSKNLSENKFDECHIKPGTKFMMKFYKCLHYFISHRMDTDQLWRSLKIILSNANVPGEGEQKIVNFIRKQSNLLTHVIYGSDSDLILLGLSTHQSNLLISHEFNDSENRFVCISLSKLRTELMNESKQISSLRNVERFIDDWIFLCLLFGNDYLPKSFSMDFFGYSITMEMLLNVYRRVLPKSNDYLTENGSINQNRLILFFKALYELDKDGKLRRTIYYENKFHIQNNQLENFVSKLVEDYVRGLSWTLEYYFGTVPSWDWLVIDFN*