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SCNpilot_expt_300_bf_scaffold_816_14

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 14449..15708

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC family n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCP9_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 421.0
  • Bit_score: 723
  • Evalue 1.20e-205
  • rbh
TolC family type I secretion outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 91.0
  • Coverage: 421.0
  • Bit_score: 723
  • Evalue 3.40e-206
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:ABQ70065.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 421.0
  • Bit_score: 723
  • Evalue 1.70e-205

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGATCCGCAAGCGGGCGATACCTCTTCTGGCGTGCCTGCTGGCGGGCGTCGCCATGCCGGCGCGCGCGACGACGCTGGAAGAGGCGATCGCGGCCGCCACGAACCACGCGCCCGAAATCGAGGCGGCGCGGGCGGACGCCGATGCGGCCGATGCCCGCATCAAGGAAGCGCGGGGCGAAGGGCTCCCCAGCGCGACGCTGAGCGGGACGATCGGCTACGGCCGGCTTGACCCTCAGGGCTTTTTCGGGCTTCCGGCAGCCAATGTCACGCCGCGCGCGGCGCAACTCACCATTGAGCAGCCCCTCTATATGGGGGGCCGGGTCAGCGCCGGGATCGCGCAGGCGAAAGCCGGAAGTGCGGCGGCGCGCGCAGGTGAAAGCATGACGCGCGGGCAGATCGTCGTCGCGACGGTCCAGGCCTATGGCGACGTGCTGACCGCGCGGCGCATGGTTGCGCTCTATGAGCTGATGGTCGGCCAGATGGAGGAGATCCAGCGCCAGGCCCGGCTTCGCTTCAAGGCGGGGGAAAGCCCCAGCACCGACATGGCGCAGGCGGCGGCTCGTCTTGCCGAAGCTCGGGCCGCGCTTGAGGCGGCGCGCGGCGCTACGGTCTCGGCGGATGCGCGGTTCGCCAATCTGACCGGCCTTGCACCGCAAGACCTTCGGCCCCTTCCGGCCAACCCGGCCCTGCCCGCATCGCTCGATGAAGCGCTCGACACTGCGCGGGCCAGCAACCCCGCTCTCGCGCAGGCTGAAGCGGCACTGAAGGCCGCCCGTGCCGGCGCAAAAGGCGCGCGGGCCGAGCGCCTGCCCACGATCGGGGCATTCGCCGAAGGCGCGACGATCCGCGATCAGTTCTTTCCCGATTATCGCGCCGACGGCGCCACGGTCGGCGTGCGGGCGCGATGGCAATTGTTTTCAGGCGGTCGCGTCTCGGCGAAGATCGCCGAATCCGACAGCGCGGCAAGAGTTGCCGACGCCCGCGTGCGCGCGGCACGCTCCGCCGTCGACGAACAGACGATCAGCGCGTTTCAGGGCGTGCGATCCGCCGTGCTGGTAGAAGCGGCCGCTGGTCAACAAGCTCTTGCTGCCGCGCAGGCGCGCGAGAGCGTTCGCCATGAGGTTCGCGTCGGCATGAAACCCCAACTCGATCTGCTCGACGCCGAACGCGAAGCGACCGCGGCCGCCGTGAGCGAGGCCAGGGCGCAAGGTGATCGCATCGTTGCGGCCTACCGGCTGCTCGCGCTGCTCGGCCGCTGA
PROTEIN sequence
Length: 420
MIRKRAIPLLACLLAGVAMPARATTLEEAIAAATNHAPEIEAARADADAADARIKEARGEGLPSATLSGTIGYGRLDPQGFFGLPAANVTPRAAQLTIEQPLYMGGRVSAGIAQAKAGSAAARAGESMTRGQIVVATVQAYGDVLTARRMVALYELMVGQMEEIQRQARLRFKAGESPSTDMAQAAARLAEARAALEAARGATVSADARFANLTGLAPQDLRPLPANPALPASLDEALDTARASNPALAQAEAALKAARAGAKGARAERLPTIGAFAEGATIRDQFFPDYRADGATVGVRARWQLFSGGRVSAKIAESDSAARVADARVRAARSAVDEQTISAFQGVRSAVLVEAAAGQQALAAAQARESVRHEVRVGMKPQLDLLDAEREATAAAVSEARAQGDRIVAAYRLLALLGR*