ggKbase home page

SCNpilot_expt_300_bf_scaffold_535_29

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 26678..27493

Top 3 Functional Annotations

Value Algorithm Source
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or a similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 271.0
  • Bit_score: 403
  • Evalue 2.50e-109
5-hydroxymethyluracil DNA glycosylase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCF58 similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 270.0
  • Bit_score: 438
  • Evalue 6.50e-120
  • rbh
formamidopyrimidine-DNA glycosylase similarity KEGG
DB: KEGG
  • Identity: 70.1
  • Coverage: 271.0
  • Bit_score: 393
  • Evalue 5.20e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGCCCGAGCTTCCCGAAGTAGAAACCACCGTCCGCGGCCTCGCCCCGGTGCTGGAGGGCGCGTCGATCGCCGCGATCGAGACGCGACGCGCAGACCTGCGCCGCCCGTTCCCCGACGACCTGCGCCAGCGGATGACGGGCGCGCGCGTCGTCTCGCTCGGGCGGCGGGCGAAATACGGGCTGGTCGCCACCGATCGCGGCGACACGATGATCTTCCACCTCGGCATGTCGGGGCGCTGGCGGATCGATCCGGGCGAATTGCTGCAGCACGACCATCTGTTGATCGAGACGGGAGCGGGGCGGCGCGTCGCGCTCAACGATCCGCGCCGATTCGGCTCGATCGACCTGTGGCGCAGCGACGCGCTGGCGGACTTCCCGGCCTTCGCCGCGCTGGGGCCGGAGCCGCTGGGGCCGGACCTGACCGCCGCCTATCTCTACCGGATGCTCGCCGGGCGGCGTGCGTCGATCAAGCTGATGCTGCTCGACCAACGGATCGTCGCGGGGCTGGGCAACATCTATGTCTGCGAGGCGCTGCATCTCGCGCATATCTCGCCGAAACGCGCAGCGGGCGATGTGTCGCGCGCGAAGCTGGCGCGGCTCGTTGAGACGATTCGCGCGGTGCTGCTCTCCGCGATCGAGGCGGGCGGATCGTCGCTGCGCGACTATGCCCGGCCCGACGGCGAGCTCGGCTATTTCTCGAAGCAGTTCCTCGTTTACGGCCGCGAGGGGCTGCCGTGCGCATGCGGCGGCGTGGTGGAGCGTTATGCCGAGGGCGGGCGATCGACCTTCTGGTGTCCGGCCTGTCAGCGTGGTTGA
PROTEIN sequence
Length: 272
MPELPEVETTVRGLAPVLEGASIAAIETRRADLRRPFPDDLRQRMTGARVVSLGRRAKYGLVATDRGDTMIFHLGMSGRWRIDPGELLQHDHLLIETGAGRRVALNDPRRFGSIDLWRSDALADFPAFAALGPEPLGPDLTAAYLYRMLAGRRASIKLMLLDQRIVAGLGNIYVCEALHLAHISPKRAAGDVSRAKLARLVETIRAVLLSAIEAGGSSLRDYARPDGELGYFSKQFLVYGREGLPCACGGVVERYAEGGRSTFWCPACQRG*