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SCNpilot_expt_300_bf_scaffold_724_26

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 19611..21905

Top 3 Functional Annotations

Value Algorithm Source
type IV secretory protein VirD4 n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C5AE similarity UNIREF
DB: UNIREF100
  • Identity: 73.9
  • Coverage: 770.0
  • Bit_score: 1148
  • Evalue 0.0
  • rbh
IncW plasmid conjugative protein TrwB (TraD-like protein) {ECO:0000313|EMBL:KEQ54790.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphing similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 774.0
  • Bit_score: 1140
  • Evalue 0.0
conjugal transfer protein TraD similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 777.0
  • Bit_score: 1123
  • Evalue 0.0

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Taxonomy

Sphingobium chlorophenolicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2295
ATGGCGCGCGCTGACATCCGCTCGGACGGGCGGCCAATCCCGCTCAAGCACCATTCGGCACGCGGCAAGGTCCAGCGCAACTCGGGCAATTTCACCCGCGGTTCGCAGCTCCTCACCCACGAGGTGCTGATGTGGTTCGCCGGCGCGAAGCTGCCGGTCATCGTCTGGTTTTTCTGCTTCCTGATCGCCTATTCGGTAATCCTCTCGATCATGCTCGACGAGCACGAGATCCAGCTCATCGGCATGCGGCTCTATGCGATGCTCTGGAACTGGATCGGCGCGAACCCGATGAAGCCGGTCAACCTGACGCTCCCCGACGGCCACATCCGCCCGACCGTGATGGCGGTGGTCGAGCATATTCCCCAGGTCATCACCGCCTCGGGCAAGGCGATCCGCGGCCTCATCGGCTCGTTCTTCGTGTCGTTGTTTGCGACGATCCCGCTGTCGATCTGGTTCGTCGACCTGTCGCGGCGGCGGGGCCGGACGATCCTTCAGGAACGCCACGAGCGCGGCGCGATGCTGGTCGAACGCGACGTGCTCGCCGGCGAGATCGCGCGCCACAACCGGGCCTGTTTCGAAGCCGATGCGCGGACGCATTATCCCGATCTGACTCCGGCCGAAGTAGTGCGGCTGCCGTTCGCGGCGCGCAAGGCGGCGGGAATCCATCACCCGTACAGCCTGGCCGGCATCGCCTATCCCTACCGGCTCGAGCAGAGCCATACGATGATCATCGGCACGACCGGCGCGGGCAAGACGACCGAGCTGCGGCGGCTGGTGACGCAGCTGCGCGAACGGCAGGACACCGCGGTCGTCTTCGACCTGACCGGCGCCTATGTCGAAAGCTTCTACGACCCCGCGCACGACACCATACTCAACCCAATGGACCAGCGCTGTCCGGCCTGGTCGATCTTCGCCGATTGCACGACGCATAGCGAGTTCACGGCCGCGGCGGCGGCGCTGATCCCGGCCGACGGCGGCTCGTCCGAACCCTTCTGGGCGCTTGCCGCGCGCACGCTGTTCATCGAGATGTGCGTAAAGCTGCAGGAGGGCGGCGCGACGACCAATCTGGCGCTGTCCGAGAACCTGATGACCGCCGATTTGAAGCGCGTGCATCGCTTCCTCGCGAACACCATTGCCGACCCGCTGACCGCGCCGGAAGCCGCGCGCATGGCGGAGTCGATCCGGGCGGTGTTCAACACCAATGCACAGGTGCTTCGCTTCCTGCCCGACGAGGGGCCGCGCTTCTCGATCCGCGACTGGATCACCGGCGACAAGCAGCCCGGCAGCATCCTGTTCGTCACCTCCAACTATGTCGATCTGCCGATGAACCGGGCGCTGCTGACGCTGTGGATGGACCTTGCGATCAACCGGTTGATGACGCTGCCGCGCACCCGCTCATTGCGAACGTGGTTCCTGTTCGACGAGCTGGGCGCGCTGCACCGCCTGCCGGCGATCGAGAACGGACTCCAGACCGCGCGTTCGTTCGGCGGCGCAATGGTGCTGGGACTGCATAGCTTCGAGAAACTGATCGAGGTCTATGGCGAGCAGGGCGCACGCAACCTCGCCAGCCTCGCCCGCACCAAGCTCATTCTCGCGACCGCCGATCTCGACACCGCCGAGCAGTGTGCCCGCTACATCGGCAACCGCGAAGTCCGCCAGATGGATGAGGCTTACAGCTACGGGTATAACAACACCCGCGACGCCTCGACGCTGACCCCGCGCAAGCAGGTCGAGCCGCTCGTCATTGCCGACGACATCACCAACCTGCCGTCGATGTACGGGTTCGTAAAATTCCCCGATGGGTTCCCGGCCGCCCGGATCAAGCTCGTCTGGCGCGATTACCCGAGCATCGCTGAGGGCTTCATCGCGCGACCCGATCCGAAGCCCGTCCGTTCGAAGCGCGGCGCGGCGGCCTTCGCGGAAGGTGAGGGGGAGCAGGGTGGCCGGGACGGGTCGGGCCAGGTGGTGCATGAGGCGGGGGAGGCGCTCGACGCCGCCCGCGCGCTGGCGGCATCGATCCTGAGCGCGCCGACCGAGGACGAGCTCGCCGCGCGCGCGCAGGATGGGGAGCGGACGGATGCAATCGTGCCGGTCGATGCCGACGCGCATCGCCGCGCCGGCGAGCCGGCAAAACCGCGTGAGCCCGACGACCCGCGCGGCGCCGATGCAGCCGCGCGCCGTTCCGGTCGCGATGCGCCGCGCAGCACGGCTGTCGAGGATCTGACGCTCGTCGAGCTGCGCCAGGATTTCAGCGAGCCGGACGCCGGGCATGACGGCCCGGACATGGGCATCTGA
PROTEIN sequence
Length: 765
MARADIRSDGRPIPLKHHSARGKVQRNSGNFTRGSQLLTHEVLMWFAGAKLPVIVWFFCFLIAYSVILSIMLDEHEIQLIGMRLYAMLWNWIGANPMKPVNLTLPDGHIRPTVMAVVEHIPQVITASGKAIRGLIGSFFVSLFATIPLSIWFVDLSRRRGRTILQERHERGAMLVERDVLAGEIARHNRACFEADARTHYPDLTPAEVVRLPFAARKAAGIHHPYSLAGIAYPYRLEQSHTMIIGTTGAGKTTELRRLVTQLRERQDTAVVFDLTGAYVESFYDPAHDTILNPMDQRCPAWSIFADCTTHSEFTAAAAALIPADGGSSEPFWALAARTLFIEMCVKLQEGGATTNLALSENLMTADLKRVHRFLANTIADPLTAPEAARMAESIRAVFNTNAQVLRFLPDEGPRFSIRDWITGDKQPGSILFVTSNYVDLPMNRALLTLWMDLAINRLMTLPRTRSLRTWFLFDELGALHRLPAIENGLQTARSFGGAMVLGLHSFEKLIEVYGEQGARNLASLARTKLILATADLDTAEQCARYIGNREVRQMDEAYSYGYNNTRDASTLTPRKQVEPLVIADDITNLPSMYGFVKFPDGFPAARIKLVWRDYPSIAEGFIARPDPKPVRSKRGAAAFAEGEGEQGGRDGSGQVVHEAGEALDAARALAASILSAPTEDELAARAQDGERTDAIVPVDADAHRRAGEPAKPREPDDPRGADAAARRSGRDAPRSTAVEDLTLVELRQDFSEPDAGHDGPDMGI*