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SCNpilot_expt_300_bf_scaffold_870_26

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(25231..25617)

Top 3 Functional Annotations

Value Algorithm Source
ribosome-associated protein IOJAP n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC98D similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 123.0
  • Bit_score: 194
  • Evalue 5.90e-47
ribosome-associated protein IOJAP similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 125.0
  • Bit_score: 190
  • Evalue 4.10e-46
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sp similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 125.0
  • Bit_score: 190
  • Evalue 2.00e-45

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
TTGCCCGCATCCGCCAACGCCTATCGATCGCCCGACGCAGACAGCGTCGCGGCGCTCCATAAGCTCGTGCTCGACAGCCTCGACGACGATCAGGCCGTCGATATGATCTCGATCCCGCTCGCCGGGAAATCCTCGATCGCCGATCACATGGTGATCGCGTCGGGTCGGTCGACCCGGCAGGTCGCCTCGATGGCGTCGAAGCTCGCCGAGAAGATCAAGGGGAAGACCGGGCAGACGCCCCGGATCGAGGGCCTGCCCACCGCCGACTGGGTGCTGATCGACGCGGGCGACGTGATCGTCCATCTGTTCCGCCCGGAGGTGCGCACCTTCTGCAATCTCGAGGGGATGTGGTCGTTCGGGGATGCGCCGCCGGCCGGGAACGCCTGA
PROTEIN sequence
Length: 129
LPASANAYRSPDADSVAALHKLVLDSLDDDQAVDMISIPLAGKSSIADHMVIASGRSTRQVASMASKLAEKIKGKTGQTPRIEGLPTADWVLIDAGDVIVHLFRPEVRTFCNLEGMWSFGDAPPAGNA*