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SCNpilot_expt_300_bf_scaffold_647_5

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(3755..4843)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488EC9 similarity UNIREF
DB: UNIREF100
  • Identity: 60.1
  • Coverage: 358.0
  • Bit_score: 404
  • Evalue 8.10e-110
  • rbh
Regulatory protein LuxR {ECO:0000313|EMBL:KGB56754.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis s similarity UNIPROT
DB: UniProtKB
  • Identity: 71.5
  • Coverage: 361.0
  • Bit_score: 476
  • Evalue 4.00e-131
regulatory protein LuxR similarity KEGG
DB: KEGG
  • Identity: 59.8
  • Coverage: 363.0
  • Bit_score: 399
  • Evalue 9.60e-109
  • rbh

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGGCAAAATCTGATCAAGGCGCATTCTCCGATCTGCTTTCGGCGCTCTATGGGGGGCTGCTGGAAATGGCGCCGTGGGAGCGTTTCCTGCGCGAATTCGCGGCATGGCTCGATGCGACCTACGCCACGCTGATCCTGACCGCGCCGGGCATGACGACGCCGGGCGCGATCCTGACGCCGGGCGCGCCCGCCGAGCGCAGCGAGGAATATGCCGAGAGCTTCTTCGCGAGCGATCCGTTCACGGGCCTGCCCGAAGGCAAGGTGACGGCCTTCGCCGAATTCCTCGGCGGCGAGATGGCGCGCGACAGCGATTTCTATCGCGACTTCCTCGCGGCGGCGGGGGGCGACCAGATCCTCGGCGTCGATCTTCGCTTCGACAGCGGGTTCGAGGCGCGGTTGCGCGCGACCCGCGATCGCAGCCGCCCCGATTTCGGCCAGGTCGAGCGCGCGGCATTTCAGGCGATCGTCCCACACTTGCGCCACGCGATCGGTCTTTTCGAGCGGTTGCAGGTCTCCGGCGCGGAACAGGGCGTCTATCGCGGCACGGTGGAGCAGATGGGGGTCGCCGCGATCATCCTCAATCGCGACGGCCGGGTGGTGCGGACCAATGCGGTGGCGGACCGGCTGCTGGCGGCGGGGGATGGGCTTGCGGTCGCCGATTGCCGGTTGCGGCTCAAGGATGCGGCGCAGCGCAAGGGGCTGGACGCGCTGCTGAGATCGCTCGACGCCAATCCCGCACCGCAGCGTTTCCGCATCACACGCGCCTCGGGCCGCGACCTTGCCGCGATCGCCAAGCCGATCGCCGCGCCCGCCTTCATGCGCGGTGGTGCGGCGCTCGCCCTGTTCGTCAGCGATCCGGGGCATGAGGCGCAGTTCGATCCCGAAGCCATCCGCGACCTGTTCCAGCTCACCCGCATGGAGGCGAACCTCGCGGTGGCGCTGGCCAGCGGGCGCTCGCTGGTCGATGCGGCGGACGCGCTGGGCATCGCGCACAATACCGCGCGGTCGCACCTGCGCTCGATCTTCGCCAAGACGGGCGCGCGCCGCCAATCGCAGCTCGTTCACCTGCTGCACGGCGGAGTCCAATAG
PROTEIN sequence
Length: 363
MAKSDQGAFSDLLSALYGGLLEMAPWERFLREFAAWLDATYATLILTAPGMTTPGAILTPGAPAERSEEYAESFFASDPFTGLPEGKVTAFAEFLGGEMARDSDFYRDFLAAAGGDQILGVDLRFDSGFEARLRATRDRSRPDFGQVERAAFQAIVPHLRHAIGLFERLQVSGAEQGVYRGTVEQMGVAAIILNRDGRVVRTNAVADRLLAAGDGLAVADCRLRLKDAAQRKGLDALLRSLDANPAPQRFRITRASGRDLAAIAKPIAAPAFMRGGAALALFVSDPGHEAQFDPEAIRDLFQLTRMEANLAVALASGRSLVDAADALGIAHNTARSHLRSIFAKTGARRQSQLVHLLHGGVQ*