ggKbase home page

SCNpilot_expt_300_bf_scaffold_647_22

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 16009..18429

Top 3 Functional Annotations

Value Algorithm Source
Putative TonB-dependent receptor n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YQ55_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 44.3
  • Coverage: 824.0
  • Bit_score: 649
  • Evalue 4.20e-183
  • rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAD50797.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 824.0
  • Bit_score: 649
  • Evalue 5.90e-183
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 828.0
  • Bit_score: 624
  • Evalue 4.10e-176

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium tardaugens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2421
ATGATACGCGCCAATCTCCGCTTCGCGGCCAGCCTGGCAGTTCTTTCCGCCGTGCTCGCCACCCCCGCCTTGGCGCAGGACGCCACCGCGCAGAAGCCAGCCGTGGACGAGGGCCGCATCACCGATGTCGTCGTCACCGCCCGCCGGCAGGAGGAAAGCATCCAGTCGACCCCGGTCTCGGTCTCCGCGCTGGGCGCGCAGACGCTCGACCAGCTCAATTTCAGGAGCGTCGACAAGCTCACGCAGCTCGTGCCCAACGTCGCGATCTCCGAAGCCTCGGGCAGCATCACCGGCACCCAGCCCTATATCCGCGGCATCGGCTCGGCCGAGCCGCTGCTGACGATCGACAGCCCCGTCGGCATGTATCTCGACGGCGTGTATCTGGGCCGGCAGGCGGCGAACAACTTCGACCTCGTCGATCCCGAGCGGATCGAGGTGCTGCGCGGCCCGCAGGGCACCCTCTACGGCCGCAACACCACCGCCGGCGCGATCAACATCATCACCAAGAAGCCCCCGCAGGAATTCGGCGCCGAGCTGAAGGCGGGCTACGGCAGCTACAATGCATGGTTCACCCGCGCCTCGCTCGACACCGGCGCGTGGGGCAACAGCGGCCTTTCAGCGAGCTTCGCGGTGACGCATAGCGAGCGCGACGGCTTCGTCGACAACCCCAACACCCCGCGTGATCGCGATCCCGGCGCACGCAAGACCACCGCCGCCTGGGGCAAGATCCACGGCGAATGGGACAAGCTGACCGTCGACGTGTCGGCGGACTGGAGCTATTCGAAGGGTCAGCGCGGGCCGTTCGAGATCATCTCCGCCTATCAGCCCGCCGCGACCTATTTCGCGCGCTCGCCATCCTATGGCGGCGACCCCTTCGTGGTCAGCCCGCAATATCAGGACAAGCTGCCTACCGAATATGTCGGCCAGCAGACCGCGAAGACCTATGGCACGGCGATCACCGCCGCTTACGAGGTGAGCAAGGCGCTGACCTTCAAGTCGATCACCGCATGGCGCGGCTGGGATTCGAGCGAGCCGACCAATTATGCCGGCAACCTGATGGGCGAAGTGGTCGATTTCACCTCGCCCACGCTCTATTCGGTGCAGCGCGTCTCGCCGTTCGTGGCCTATAACCAGGATCTGCGGCAGCGCCAGTTCAGCGAGGAATTCCAGGTCCTCGGCAAGACCGACACGTTGAGCTACGTCCTCGGCGCCTATTATTTCAACGAGCGCGCGAGCGAGCTGAACGACAATTACTACACGATCGTCCTGCCGCCGGCCTATCTCGCCGGGCTGGGCTATCCGGCCGCCGTGGGCGACGCGCTGACCGGGCAGGGCATAGACCTCATCGGCGTCAACCTCGGCCAGACGATGGCCTATCACACGCGCAGCGAATCCGTCGCCGGCTTCGGCCAGTTGAGCTGGAAGCCGATGATCCTCGGCCAGCGGCTCGAACTGACCGGCGGTCTCCGCTACACCCATGACAGCCGCTCGATCGACGAGACGAGCATCCCGACTCCCCAGCCCTTCGCCGGCCAGCTGCCCAATCCGGGCGCCACGCCGGGGCCGTCGCGCACCGGCGACCTGTCGTTCAGCAACTGGTCGTACCTCGGGTCGATCAGCTTCCAGTGGACCCCGGACATCCTCACCTATGCGCGCTTCTCGACCGGCTACAAGTCCGGCGGGTTCGACGCGCGCGCGGGCGTGGATCTGGCGACCGGCGTCACCTTCCCCTTCACCTTCAAGCCGGAGAAGGCGACCTCCTATGAAGTCGGGTTCAAGAGCGAGTTCCTCGATCACCGCCTGCGGCTGAACGGTTCGCTGTTCCGCACCGACTATGACGACCTTCAGGTGCCGCAATATGCTGGCGGCAACGGCTTCATCCCGAACGCCAACGCGCGCTACCAGGGCTTCGAGCTTGAGCTGCTGGCGATACCGATCAGGCGCGTCCAGTTCGACGCCAGCCTCGGCTATGTCGATCCGACCTATACCGAGTTCCTGCTCGCCGATCCCAATACCGGCATCGTCGGCGATTATGCGAAACAGGCGAAATTCCCCTATGTCCCCAACTGGACGGTGCATGTCGGCGCGCAGGCATCGCACCGGCTGGACTTCGCCGACCTGATGCTGCGCGTCGATTACGCGCATACGAGCAAGCGCTATTTCCACACGATCGATCTGCTCAACCCGGCGAACGACGCGATCGCCGATCCGGGGCAGGATCTGCTCAGCGCGCGGATCAGCCTGTCGGATATCGATCTGGGCGGCGGGCGCACGAAGCTGCGCGTCAGCGTCTATGCCGACAACCTGCTGAACGACCACACGCGGCAGGCGGGCATCGATTTCGGCCCGTCGATCGGCATCGCCGGCGTGAACTATGGGCCGCCGCGCACCTTTGGGGTCGATGCGACGCTGAAGTTTTGA
PROTEIN sequence
Length: 807
MIRANLRFAASLAVLSAVLATPALAQDATAQKPAVDEGRITDVVVTARRQEESIQSTPVSVSALGAQTLDQLNFRSVDKLTQLVPNVAISEASGSITGTQPYIRGIGSAEPLLTIDSPVGMYLDGVYLGRQAANNFDLVDPERIEVLRGPQGTLYGRNTTAGAINIITKKPPQEFGAELKAGYGSYNAWFTRASLDTGAWGNSGLSASFAVTHSERDGFVDNPNTPRDRDPGARKTTAAWGKIHGEWDKLTVDVSADWSYSKGQRGPFEIISAYQPAATYFARSPSYGGDPFVVSPQYQDKLPTEYVGQQTAKTYGTAITAAYEVSKALTFKSITAWRGWDSSEPTNYAGNLMGEVVDFTSPTLYSVQRVSPFVAYNQDLRQRQFSEEFQVLGKTDTLSYVLGAYYFNERASELNDNYYTIVLPPAYLAGLGYPAAVGDALTGQGIDLIGVNLGQTMAYHTRSESVAGFGQLSWKPMILGQRLELTGGLRYTHDSRSIDETSIPTPQPFAGQLPNPGATPGPSRTGDLSFSNWSYLGSISFQWTPDILTYARFSTGYKSGGFDARAGVDLATGVTFPFTFKPEKATSYEVGFKSEFLDHRLRLNGSLFRTDYDDLQVPQYAGGNGFIPNANARYQGFELELLAIPIRRVQFDASLGYVDPTYTEFLLADPNTGIVGDYAKQAKFPYVPNWTVHVGAQASHRLDFADLMLRVDYAHTSKRYFHTIDLLNPANDAIADPGQDLLSARISLSDIDLGGGRTKLRVSVYADNLLNDHTRQAGIDFGPSIGIAGVNYGPPRTFGVDATLKF*