ggKbase home page

SCNpilot_expt_300_bf_scaffold_1078_6

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6909..8036)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418) RepID=C6XP79_HIRBI similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 374.0
  • Bit_score: 326
  • Evalue 2.90e-86
  • rbh
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 374.0
  • Bit_score: 326
  • Evalue 8.20e-87
TonB-dependent receptor {ECO:0000313|EMBL:ACT60259.1}; Flags: Precursor;; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hir similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 374.0
  • Bit_score: 326
  • Evalue 4.10e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Hirschia baltica → Hirschia → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1128
ATGGATGAGAGCGGCCACCAGTTCAGCCAGGAAATCCGCCTCGTCTCGCCGTCCGGCCAGCGGCTGGAATATCTGTTCGGCGGTCTTTACCTGCGCGGCACGCTGAACAACACCACCGTCTATACCGCCAATTATCCGTTCGAGCCGGTGCCGGGCTCGCCGTTCGCCGGGTCGGAAGCGACCGATTTCTATCAGGTTACGACCGATTATTCGGGCTTCGGCCAGGTCAGCTACCGCATAACCGATCGTCTGAAGGCGACCGCGAGCGCCCGCTTCACCCATGAGGAGAAGGATGTCGATCTGGGGCGGCGGGTTCTGGTCCCCGGATTCTTCAGCTTGGCGGTCTTCCCGCCCTATGCGCCCTTCTCCATGGCGCGGAGCGAGAGCAATTTCGACTATTCGGCGGGTCTGGAATATCAGATCACGCCGAACGCCCTCGTCTATGCCTCCTATGGCAAGGGCACGAAGGGCGGCGGCTTCGCCCAGTCAGTGACCGAGCTGGATAAGGCGGAATATGGCAAGGAAATCTCGCGCACCAGCGAAGTCGGCGTGAAACTGTCGGATCCGGCGCGCAAGTGGGTCTTCAACCTGTCGGCGTTCAATACCAATGTGGACGGCTTCCAGGTGGTGTCCTTCACCGGCATCCAGTTCATCGTCGTCAATACCGACCTGCGCAGCCGGGGCTTCGAGCTTGCGTCCTACTGGTATCCGGTTCCGTGGCTGCGGCTGTTCCTCAACAACACCTACGCCGATGCGAAAGATCGCCACACCGGCGCGCCCATTCCGCTCGCTCCGAAATGGACCGGAACCGGCGGCTTCAACGTCGACACGTCGCTCAGCCCGGCCCTGCGTTTCAAGCTGGACGGCTCGATAGACTGGCGCTCGAAGCGCTATTATCAACAGGACCCCGCGACTTCGCCGCCGGGCAAGTCCTTCGTCACTTATAATCTCGGCGTGGCGCTCGCGGACCAATCGGACAAATATGAGCTGCGTCTGATCGGCCGCAACCTGACCAACGCCAACAGCATTGCCTTCGCTTTTCCGACGCCGTTCCTGCCCGCGGGCAACCAGAACGCGATCTCGGAGCGGGGCAGGACCATCGCCCTACAACTGAGCGTGAAATACTGA
PROTEIN sequence
Length: 376
MDESGHQFSQEIRLVSPSGQRLEYLFGGLYLRGTLNNTTVYTANYPFEPVPGSPFAGSEATDFYQVTTDYSGFGQVSYRITDRLKATASARFTHEEKDVDLGRRVLVPGFFSLAVFPPYAPFSMARSESNFDYSAGLEYQITPNALVYASYGKGTKGGGFAQSVTELDKAEYGKEISRTSEVGVKLSDPARKWVFNLSAFNTNVDGFQVVSFTGIQFIVVNTDLRSRGFELASYWYPVPWLRLFLNNTYADAKDRHTGAPIPLAPKWTGTGGFNVDTSLSPALRFKLDGSIDWRSKRYYQQDPATSPPGKSFVTYNLGVALADQSDKYELRLIGRNLTNANSIAFAFPTPFLPAGNQNAISERGRTIALQLSVKY*