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SCNpilot_expt_300_bf_scaffold_1081_25

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(20146..20391)

Top 3 Functional Annotations

Value Algorithm Source
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 81.0
  • Bit_score: 146
  • Evalue 1.20e-32
Orotidine 5'-phosphate decarboxylase n=1 Tax=Sphingomonas sp. S17 RepID=F3WT12_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 81.0
  • Bit_score: 144
  • Evalue 3.40e-32
orotidine 5'-phosphate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 81.0
  • Bit_score: 141
  • Evalue 1.10e-31

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
CGGGCGGGGGTCGACGGCATCGTCTGCTCCGGCGAGGAGGTGAAGGCGGCGCACAAGCTCTGGCCGAAGGGTTTCTTCGTCGTCCCCGGCGTGCGCCCGGCGGACGGCGTGGTCGCGGACCAGAAGCGCGTGGTGACGCCGCGCGCGGCGCTGGACAACGGCGCATCGATCCTGGTGATCGGCCGACCGATCACGCAGGCCGAGGACCCAGACGCGGCGGCGCGGGCGATCGGGGCGACGCTGTAG
PROTEIN sequence
Length: 82
RAGVDGIVCSGEEVKAAHKLWPKGFFVVPGVRPADGVVADQKRVVTPRAALDNGASILVIGRPITQAEDPDAAARAIGATL*