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SCNpilot_expt_300_bf_scaffold_2096_14

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(13710..14351)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003670E40 similarity UNIREF
DB: UNIREF100
  • Identity: 31.6
  • Coverage: 209.0
  • Bit_score: 107
  • Evalue 2.10e-20
Transcriptional regulator {ECO:0000313|EMBL:EYR77364.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.4
  • Coverage: 194.0
  • Bit_score: 72
  • Evalue 1.00e-09
putative transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 30.3
  • Coverage: 228.0
  • Bit_score: 67
  • Evalue 5.10e-09

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGCGGGTCGAAACGATGTCGCGACGCGAGGAGAATAATGAAAAGCGCCGGCGCAAGCTGCTGACCGCGGCGCGAACTTTGTTCGACCGGCAGGGCTTCGAAGCCACGACCGTCGCCGAGATCGCCAAGGCGTCGAAGTCCGCGCTGCGAACGGTCTACAACGTCTTTCCGGCCAAGATCGACATTCTGGCGGCCTTGCTGTCGGTCGAAGCGAGAACCCAGCTCGCCGCCGGCCTTGCCGGGCTGAAGGCGACCGAAGGCGAAGACCCCCAGCATCGCCTGATGCAATTGCTGGAAATGCTGACGCATATCTTCACGGGCGGGTCCCGGCAGGAGAGCCGGCTCGTCACCGCCCACGCCATTTCCTCCGGCCGAACGACGCTGGCCGGCCAAATCTATGACGATATCGACAAGACGGTGCAGCGCGAAATCCTCGACCTGCTGCTGGAACTTGAGGAGCGGCGCGCTTTTCAGGACGGCGTAGCAGCGGAGGCGCTGGCGCGGCTCGTCTTCAACGCCGTCAACGGGCTGTTCTTCCTCTGGCTCGGCGACGATGCGATGACTTCTGCGCAATGCCTGGAACGTCTGCGGGAGCATGTCGCCATCCTCCTTCCCCGGCAGGAAGACGGGCAGCGCGCATAG
PROTEIN sequence
Length: 214
MRVETMSRREENNEKRRRKLLTAARTLFDRQGFEATTVAEIAKASKSALRTVYNVFPAKIDILAALLSVEARTQLAAGLAGLKATEGEDPQHRLMQLLEMLTHIFTGGSRQESRLVTAHAISSGRTTLAGQIYDDIDKTVQREILDLLLELEERRAFQDGVAAEALARLVFNAVNGLFFLWLGDDAMTSAQCLERLREHVAILLPRQEDGQRA*