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SCNpilot_expt_300_bf_scaffold_2534_2

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(402..1055)

Top 3 Functional Annotations

Value Algorithm Source
Cyclic nucleotide-binding protein n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C2N5_HYPNA similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 232.0
  • Bit_score: 112
  • Evalue 6.50e-22
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KGB56781.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 231.0
  • Bit_score: 302
  • Evalue 3.60e-79
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.0
  • Coverage: 232.0
  • Bit_score: 257
  • Evalue 2.70e-66

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Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
TTGGATGAGCGAACGGAAATCGACGCGACCTTGGGCGCCGGGGGCTGGTTCGCCTCGCTGCCGGCGGAAATACGTGCCGAAGTGCTGTCGGCGGGCACGGTCCGCAACCTGACTGCGGGCAAATGCCTGTTTGACGAGGACGGCGCGCCAACGGGCCTTCATGCCGTCCTGAGCGGGGAACTCCATATCATCGGCCTGTCGGCCGACGGGAATGCCATCACCATGGGCATAATCCGTCCCGGGGACTGGACCGGATTCCTGACCTGCCTCGATAATCTGCCGCACTTTTATTCAGGGATAGCGCGCGCGGACACACGGACGTTTTCACTTCGCCAGGCGGATGTGACGCGGATTTTCGAGCGCGATGTCGCTACCTTTCGCCTGTTGCTGATGCCGGTCGGTCGGCCGCTGGCACAGCGCGTCGCGGCGCGGCTTAGCGATCTTGGACGCTCACCTTACCAATTCCCTGTTGGTCCGGTGGTGCCGTTGCGGAATTTCAGCCAGGAGGAACTGGCGATGTCGGTCGTCGCGACACGACCGAGAATCAACAAGATTCTGCGCGACTTCGCGGCGAAAGGAATGATCGAACTCGGCTATGGCCAGATCACCGTCATCGACCTTCCGGCGCTGGAGCGTTTCGCGCGGGACGACTGA
PROTEIN sequence
Length: 218
LDERTEIDATLGAGGWFASLPAEIRAEVLSAGTVRNLTAGKCLFDEDGAPTGLHAVLSGELHIIGLSADGNAITMGIIRPGDWTGFLTCLDNLPHFYSGIARADTRTFSLRQADVTRIFERDVATFRLLLMPVGRPLAQRVAARLSDLGRSPYQFPVGPVVPLRNFSQEELAMSVVATRPRINKILRDFAAKGMIELGYGQITVIDLPALERFARDD*