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SCNpilot_expt_300_bf_scaffold_3100_12

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5820..6557)

Top 3 Functional Annotations

Value Algorithm Source
transposase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC554 similarity UNIREF
DB: UNIREF100
  • Identity: 90.2
  • Coverage: 245.0
  • Bit_score: 458
  • Evalue 4.20e-126
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM01866.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 245.0
  • Bit_score: 467
  • Evalue 1.60e-128
putative transposase similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 245.0
  • Bit_score: 409
  • Evalue 6.30e-112

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Taxonomy

Sphingomonas parapaucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGACGGTGCTGGCGATGAGTGCTGCTGAGATCACCCGCTTCGACACGCTGATGCGGCTCGACCGCGGCGAGATCCGGGTCGCGGACGCGATGGAGCTGCTCGGCCTTGCGAGGCGGCAGGTGTACCGGCTGCTGGGCCGACTTCGAGAGGACGGCGCTAGCGGCCTGGTGTCGCGCAAGCGAGGACGCCCGAGCAACCGGCGCTACAGCGACGCCTTCCGCGCCGAGGTGGTCACGCTGGTGCGCGAGCACTACGCCGACTTCGGACCGACGCTGGCGCGCGAGTACCTCGCCGAGCGCCACGGTATCGGGCTGTCGTGCGAGACCCTGCGGCGCATCATGCTGGAAGCCGGGCTGTGGCAGGACCGTGCGGCCAAGCGCCCTCGCCCGTACCAGCCGCGCTATCGGCGCGACTGCCGCGGCGAGCTCGTCCAGGTCGACGGCTCCAAGCACTGGTGGTTCGAGGGCCGCGGTCCGCAATGCACGCTCCTGGTCTTCATCGACGATGCCACCAGCGAGCTAATGCACCTCGGGATGGTCGAGAGCGAGAGCACCTTCTCGTACATGCGCGCGACGAGGACCTACCTCGAGCGGCACGGCAAGCCGGTGGCCTTCTACACCGACAAGCACAGCGCCTTCCGCAACAACACGGCCTCGGCGAAAGGCGACGGCATGACCCACCTTGGCCGCGCACTGGACCGGCTCGACATCGAGCTCATTTGCGCGAACTCGCCATAG
PROTEIN sequence
Length: 246
MTVLAMSAAEITRFDTLMRLDRGEIRVADAMELLGLARRQVYRLLGRLREDGASGLVSRKRGRPSNRRYSDAFRAEVVTLVREHYADFGPTLAREYLAERHGIGLSCETLRRIMLEAGLWQDRAAKRPRPYQPRYRRDCRGELVQVDGSKHWWFEGRGPQCTLLVFIDDATSELMHLGMVESESTFSYMRATRTYLERHGKPVAFYTDKHSAFRNNTASAKGDGMTHLGRALDRLDIELICANSP*