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SCNpilot_expt_300_bf_scaffold_3100_13

Organism: SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6793..7098

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HQF0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 96.0
  • Bit_score: 65
  • Evalue 3.30e-08
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJN02388.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphap similarity UNIPROT
DB: UniProtKB
  • Identity: 39.6
  • Coverage: 96.0
  • Bit_score: 65
  • Evalue 4.60e-08
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 99.0
  • Bit_score: 64
  • Evalue 1.60e-08

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Taxonomy

Phyllobacterium sp. YR531 → Phyllobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
TTGACCGACTCAGAACTGGCGCAGCGTGTGACCAAGATCGTAGCGCAAACGCGCGCGAAATACTATAGTGTCGCGCGGCTTGCCGACCCGATCGGTATGAAGCGCTTTTCGTGCGCCAAGGCTTTCAAGCTCGCGACGGGAACCACACCGATGGATTTCGTCATGGCGCTCAGGCTGGAGCGTGCGCGCCAGCTGCTCGAAACGACGAGCTTGTCGGGCTTTGTCGATCGCAGCCATTTCAGTCGCTCATTCCGCGCGCGTTTCGGCGAGAGCCCGGCGAAGTTGTGGCGCCATAACGGCGTGTAA
PROTEIN sequence
Length: 102
LTDSELAQRVTKIVAQTRAKYYSVARLADPIGMKRFSCAKAFKLATGTTPMDFVMALRLERARQLLETTSLSGFVDRSHFSRSFRARFGESPAKLWRHNGV*